RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 PMF1-BGLAPU3KQ54 211 aa6.97□□□□□ -1.29
RBM39-226ENST00000468086 CCDC85CA6NKD9 419 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 TADA3O75528 432 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 LIMS1P48059 325 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 GPR85P60893 370 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 NFIXQ14938 502 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 NTRK3Q16288 839 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 YOD1Q5VVQ6 348 aaPredicted RBP6.96□□□□□ -1.3
RBM39-226ENST00000468086 STEAP3Q658P3 488 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 IFNL3Q8IZI9 196 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.96□□□□□ -1.3
RBM39-226ENST00000468086 PHOSPHO1Q8TCT1 267 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.96□□□□□ -1.3
RBM39-226ENST00000468086 CDC6Q99741 560 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 BCAS3Q9H6U6 928 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 PALD1Q9ULE6 856 aa6.96□□□□□ -1.3
RBM39-226ENST00000468086 KRIT1O00522 736 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 CYP2C8P10632 490 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 SYN1P17600 705 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 MC3RP41968 323 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
RBM39-226ENST00000468086 MAMDC2Q7Z304 686 aaPredicted RBP6.95□□□□□ -1.3
RBM39-226ENST00000468086 ZC3H18Q86VM9 953 aaKnown RBP6.95□□□□□ -1.3
RBM39-226ENST00000468086 FAM126BQ8IXS8 530 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 SMARCC2Q8TAQ2 1214 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 FNIP1Q8TF40 1166 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 SMOC1Q9H4F8 434 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 SNTG2Q9NY99 539 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 PFDN2Q9UHV9 154 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 NUB1Q9Y5A7 615 aa6.95□□□□□ -1.3
RBM39-226ENST00000468086 TRBV23-1A0A0A0MS06 115 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 SH3D21A4FU49 640 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 AQP7O14520 342 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 MSCO60682 206 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 SASH1O94885 1247 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 NAT1P18440 290 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 SAPCD2Q86UD0 394 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 LINC00482Q8N8I6 264 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 PTPRN2Q92932 1015 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 DDX11Q96FC9 970 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 SRPK1Q96SB4 655 aaKnown RBP6.94□□□□□ -1.3
RBM39-226ENST00000468086 SLC6A20Q9NP91 592 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 LUC7LQ9NQ29 371 aaKnown RBP6.94□□□□□ -1.3
RBM39-226ENST00000468086 RTEL1Q9NZ71 1219 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 KDM2BQ8NHM5 1336 aa6.94□□□□□ -1.3
RBM39-226ENST00000468086 CCDC163A0A0D9SF12 145 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 FFAR3O14843 346 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
RBM39-226ENST00000468086 GRK2P25098 689 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 GRK3P35626 688 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 VWA3BQ502W6 1294 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 KCNT2Q6UVM3 1135 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 TRIM48Q8IWZ4 208 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 SP8Q8IXZ3 490 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 JMYQ8N9B5 988 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 DHRS4Q9BTZ2 278 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 PDGFDQ9GZP0 370 aaPredicted RBP6.93□□□□□ -1.3
RBM39-226ENST00000468086 PCDHB4Q9Y5E5 795 aa6.93□□□□□ -1.3
RBM39-226ENST00000468086 FAM221BA6H8Z2 402 aa6.92□□□□□ -1.3
RBM39-226ENST00000468086 FAM47E-STBD1D6RA91 191 aa6.92□□□□□ -1.3
RBM39-226ENST00000468086 DIAPH1O60610 1272 aaKnown RBP6.92□□□□□ -1.3
RBM39-226ENST00000468086 FAM153BP0C7A2 387 aa6.92□□□□□ -1.3
RBM39-226ENST00000468086 GABREP78334 506 aa6.92□□□□□ -1.3
RBM39-226ENST00000468086 SPIRE1Q08AE8 756 aa6.92□□□□□ -1.3
RBM39-226ENST00000468086 DRC1Q96MC2 740 aa6.92□□□□□ -1.3
RBM39-226ENST00000468086 ALG1Q9BT22 464 aa6.92□□□□□ -1.3
RBM39-226ENST00000468086 HSPBP1Q9NZL4 362 aa6.92□□□□□ -1.3
RBM39-226ENST00000468086 TCRBV5S2A0A599 114 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 C8BP07358 591 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 NKX3-2P78367 333 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 NFE2L2Q16236 605 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 CD300LDQ6UXZ3 194 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 OTOP3Q7RTS5 596 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 TTLL6Q8N841 843 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 KYQ8NBH2 561 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 TP53I13Q8NBR0 393 aaPredicted RBP6.91□□□□□ -1.3
RBM39-226ENST00000468086 PMFBP1Q8TBY8 1022 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 TOE1Q96GM8 510 aaKnown RBP6.91□□□□□ -1.3
RBM39-226ENST00000468086 DNAJC7Q99615 494 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 YIPF4Q9BSR8 244 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 JAM3Q9BX67 310 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 XYLT2Q9H1B5 865 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 OSBPL2Q9H1P3 480 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 DTLQ9NZJ0 730 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 MYOTQ9UBF9 498 aa6.91□□□□□ -1.3
RBM39-226ENST00000468086 BLACEA4D250 179 aa6.9□□□□□ -1.3
RBM39-226ENST00000468086 HABP4Q5JVS0 413 aaKnown RBP6.9□□□□□ -1.3
RBM39-226ENST00000468086 FAM209AQ5JX71 171 aa6.9□□□□□ -1.3
RBM39-226ENST00000468086 FOXB2Q5VYV0 432 aa6.9□□□□□ -1.3
RBM39-226ENST00000468086 TTLL7Q6ZT98 887 aa6.9□□□□□ -1.3
RBM39-226ENST00000468086 NPM2Q86SE8 214 aaKnown RBP6.9□□□□□ -1.3
RBM39-226ENST00000468086 TTLL11Q8NHH1 800 aa6.9□□□□□ -1.3
RBM39-226ENST00000468086 CXorf38Q8TB03 319 aa6.9□□□□□ -1.3
RBM39-226ENST00000468086 THAP3Q8WTV1 239 aaPredicted RBP6.9□□□□□ -1.3
RBM39-226ENST00000468086 KISS1RQ969F8 398 aaPredicted RBP6.9□□□□□ -1.3
RBM39-226ENST00000468086 EXOC2Q96KP1 924 aa6.9□□□□□ -1.3
RBM39-226ENST00000468086 C11orf84Q9BUA3 381 aaPredicted RBP6.9□□□□□ -1.3
RBM39-226ENST00000468086 JAG2Q9Y219 1238 aa6.9□□□□□ -1.3
RBM39-226ENST00000468086 WNT9AO14904 365 aa6.89□□□□□ -1.31
RBM39-226ENST00000468086 SMARCA5O60264 1052 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms