RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ARP10275 920 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 ITGB5P18084 799 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 EDNRBP24530 442 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 MAPK4P31152 587 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 MCM4P33991 863 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 MCM7P33993 719 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 UBXN2AP68543 259 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 GNL2Q13823 731 aaKnown RBP6.77□□□□□ -1.33
USP39-213ENST00000467885 KCTD2Q14681 263 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 PGM5Q15124 567 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 LETM2Q2VYF4 491 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 Q4G0T1 1027 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 TTC38Q5R3I4 469 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 ARHGEF16Q5VV41 709 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 PCNX4Q63HM2 1172 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 XRRA1Q6P2D8 792 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 MOXD1Q6UVY6 613 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 DNERQ8NFT8 737 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 IL31RAQ8NI17 732 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 NPLOC4Q8TAT6 608 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 HAS1Q92839 578 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 WNT2BQ93097 391 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 LENG9Q96B70 501 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 MMP19Q99542 508 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 MXRA8Q9BRK3 442 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 IRX2Q9BZI1 471 aaPredicted RBP6.77□□□□□ -1.33
USP39-213ENST00000467885 SCAND2PQ9GZW5 306 aaPredicted RBP6.77□□□□□ -1.33
USP39-213ENST00000467885 BCAS3Q9H6U6 928 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 GDPD2Q9HCC8 539 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 WBP1LQ9NX94 342 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 PCDHA7Q9UN72 937 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 DIS3Q9Y2L1 958 aaKnown RBP6.77□□□□□ -1.33
USP39-213ENST00000467885 SRPRBQ9Y5M8 271 aaKnown RBP6.77□□□□□ -1.33
USP39-213ENST00000467885 MYH4Q9Y623 1939 aa6.77□□□□□ -1.33
USP39-213ENST00000467885 FRMPD4Q14CM0 1322 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 ATAD5Q96QE3 1844 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 GOLGA8CPA6NN73 597 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 SPATA31C2B4DYI2 1134 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 GPR25O00155 361 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 SPTLC2O15270 562 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 MAFGO15525 162 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 DHX15O43143 795 aaKnown RBP6.76□□□□□ -1.33
USP39-213ENST00000467885 SLC37A4O43826 429 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 CCNT1O60563 726 aaKnown RBP6.76□□□□□ -1.33
USP39-213ENST00000467885 ATP9AO75110 1047 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 PPP6R2O75170 966 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 EIF3JO75822 258 aaKnown RBP6.76□□□□□ -1.33
USP39-213ENST00000467885 YEATS4O95619 227 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 SNAI1O95863 264 aaPredicted RBP6.76□□□□□ -1.33
USP39-213ENST00000467885 ADORA2AP29274 412 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 MARCKSP29966 332 aaPredicted RBP6.76□□□□□ -1.33
USP39-213ENST00000467885 PSMC4P43686 418 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 KRT85P78386 507 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 LACTBP83111 547 aaPredicted RBP6.76□□□□□ -1.33
USP39-213ENST00000467885 ATP2C1P98194 919 aaPredicted RBP6.76□□□□□ -1.33
USP39-213ENST00000467885 SP2Q02086 613 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 SP3Q02447 781 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 GRIN1Q05586 938 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 GRB14Q14449 540 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 PDIA5Q14554 519 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 CEP55Q53EZ4 464 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 ADALQ6DHV7 355 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 MAMDC4Q6UXC1 1216 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 NIPA1Q7RTP0 329 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 TMEM87AQ8NBN3 555 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 TRIM47Q96LD4 638 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 ADAM33Q9BZ11 813 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 WDR11Q9BZH6 1224 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 ARHGAP39Q9C0H5 1083 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 KCNMB3Q9NPA1 279 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 JADE2Q9NQC1 790 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 FBXO2Q9UK22 296 aaPredicted RBP6.76□□□□□ -1.33
USP39-213ENST00000467885 NOL7Q9UMY1 257 aaKnown RBP6.76□□□□□ -1.33
USP39-213ENST00000467885 TRPM7Q96QT4 1865 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 SMCHD1A6NHR9 2005 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 PFASO15067 1338 aa6.76□□□□□ -1.33
USP39-213ENST00000467885 OTOFQ9HC10 1997 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 LOC102724159A0A0B4J2E5 919 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 TBX3O15119 743 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 MSH4O15457 936 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 PSMD10O75832 226 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 MYCLP12524 364 aaPredicted RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 GCFC2P16383 781 aaKnown RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 EIF2AK2P19525 551 aaKnown RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 CMA1P23946 247 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 ICAM3P32942 547 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 ZNF76P36508 570 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 PRPHP41219 470 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 ALDH5A1P51649 535 aaPredicted RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 MAP2K1Q02750 393 aaPredicted RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 MAP2K5Q13163 448 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 SEMA3FQ13275 785 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 ORC2Q13416 577 aaPredicted RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 PWP2Q15269 919 aaKnown RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 NFKBIBQ15653 356 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 STXBP2Q15833 593 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 PRR16Q569H4 304 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 TMEM63BQ5T3F8 832 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 WDR78Q5VTH9 848 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 ARL6IP4Q66PJ3 421 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms