RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CEP131Q9UPN4 1083 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 PTCH2Q9Y6C5 1203 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 FIBPO43427 364 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 RGS20O76081 388 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 TDP2O95551 362 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 GRK4P32298 578 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 ICAM3P32942 547 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 MCM7P33993 719 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 EEPD1Q7L9B9 569 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 PLA2G4DQ86XP0 818 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 SCFD2Q8WU76 684 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 ZFP91Q96JP5 570 aaPredicted RBP16.71■□□□□ 0.27
DDX56-208ENST00000467318 WDR11Q9BZH6 1224 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 KATNBL1Q9H079 304 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.71■□□□□ 0.27
DDX56-208ENST00000467318 KCNH7Q9NS40 1196 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 CFAP45Q9UL16 551 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 PCDHB6Q9Y5E3 794 aa16.71■□□□□ 0.27
DDX56-208ENST00000467318 LAD1O00515 517 aa16.7■□□□□ 0.26
DDX56-208ENST00000467318 TBX3O15119 743 aa16.7■□□□□ 0.26
DDX56-208ENST00000467318 NEMFO60524 1076 aa16.7■□□□□ 0.26
DDX56-208ENST00000467318 ELNP15502 786 aa16.7■□□□□ 0.26
DDX56-208ENST00000467318 ZNF174Q15697 407 aa16.7■□□□□ 0.26
DDX56-208ENST00000467318 SEPT14Q6ZU15 432 aa16.7■□□□□ 0.26
DDX56-208ENST00000467318 FBXO16Q8IX29 292 aaPredicted RBP16.7■□□□□ 0.26
DDX56-208ENST00000467318 LENG9Q96B70 501 aa16.7■□□□□ 0.26
DDX56-208ENST00000467318 POLR3EQ9NVU0 708 aa16.7■□□□□ 0.26
DDX56-208ENST00000467318 MCM3APO60318 1980 aa16.7■□□□□ 0.26
DDX56-208ENST00000467318 RBM47A0AV96 593 aaKnown RBP16.69■□□□□ 0.26
DDX56-208ENST00000467318 SPATA31C2B4DYI2 1134 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 WNT7AO00755 349 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 TTLL4Q14679 1199 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 ANO1Q5XXA6 986 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 TAPT1Q6NXT6 567 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 FBXO46Q6PJ61 603 aaPredicted RBP16.69■□□□□ 0.26
DDX56-208ENST00000467318 FAM20AQ96MK3 541 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 SENP7Q9BQF6 1050 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 MRVI1Q9Y6F6 885 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 SLC37A4O43826 429 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 ZNF865P0CJ78 1059 aaPredicted RBP16.69■□□□□ 0.26
DDX56-208ENST00000467318 KRT85P78386 507 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 DNM1Q05193 864 aaKnown RBP16.69■□□□□ 0.26
DDX56-208ENST00000467318 SF3A1Q15459 793 aaKnown RBP16.69■□□□□ 0.26
DDX56-208ENST00000467318 IQSEC1Q6DN90 963 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 SLFN12Q8IYM2 578 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 USP28Q96RU2 1077 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 KCNMB3Q9NPA1 279 aa16.69■□□□□ 0.26
DDX56-208ENST00000467318 ZHX1Q9UKY1 873 aaPredicted RBP16.69■□□□□ 0.26
DDX56-208ENST00000467318 IPO5O00410 1097 aaKnown RBP16.68■□□□□ 0.26
DDX56-208ENST00000467318 PRPF40AO75400 957 aaKnown RBP16.68■□□□□ 0.26
DDX56-208ENST00000467318 ARP10275 920 aa16.68■□□□□ 0.26
DDX56-208ENST00000467318 CYBAP13498 195 aa16.68■□□□□ 0.26
DDX56-208ENST00000467318 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
DDX56-208ENST00000467318 CACNB2Q08289 660 aaPredicted RBP16.68■□□□□ 0.26
DDX56-208ENST00000467318 PTGDRQ13258 359 aa16.68■□□□□ 0.26
DDX56-208ENST00000467318 CALCRLQ16602 461 aa16.68■□□□□ 0.26
DDX56-208ENST00000467318 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
DDX56-208ENST00000467318 MAP3K21Q5TCX8 1036 aa16.68■□□□□ 0.26
DDX56-208ENST00000467318 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
DDX56-208ENST00000467318 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
DDX56-208ENST00000467318 GIMAP8Q8ND71 665 aaPredicted RBP16.68■□□□□ 0.26
DDX56-208ENST00000467318 ZNF577Q9BSK1 485 aa16.68■□□□□ 0.26
DDX56-208ENST00000467318 LRRC37A2A6NM11 1700 aa16.68■□□□□ 0.26
DDX56-208ENST00000467318 KIAA1217Q5T5P2 1943 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 NKRFO15226 690 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDX56-208ENST00000467318 MSH4O15457 936 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 MARCH6O60337 910 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
DDX56-208ENST00000467318 NASPP49321 788 aaPredicted RBP16.67■□□□□ 0.26
DDX56-208ENST00000467318 CCDC173Q0VFZ6 552 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 TRIM32Q13049 653 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 NEDD9Q14511 834 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 CCDC144BQ3MJ40 725 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 SLC9C1Q4G0N8 1177 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 PRAMEF19Q5SWL8 479 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 CCDC62Q6P9F0 684 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 ETNPPLQ8TBG4 499 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 MTMR9Q96QG7 549 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 AGO4Q9HCK5 861 aaKnown RBP16.67■□□□□ 0.26
DDX56-208ENST00000467318 PDGFCQ9NRA1 345 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 TBC1D22BQ9NU19 505 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 TFIP11Q9UBB9 837 aaKnown RBP16.67■□□□□ 0.26
DDX56-208ENST00000467318 DDX41Q9UJV9 622 aaKnown RBP16.67■□□□□ 0.26
DDX56-208ENST00000467318 FAM184BQ9ULE4 1060 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 CLIC4Q9Y696 253 aa16.67■□□□□ 0.26
DDX56-208ENST00000467318 MORC2Q9Y6X9 1032 aaPredicted RBP16.67■□□□□ 0.26
DDX56-208ENST00000467318 YEATS4O95619 227 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 INHAP05111 366 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 TXNP10599 105 aaKnown RBP16.66■□□□□ 0.26
DDX56-208ENST00000467318 AKR1A1P14550 325 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 PRPHP41219 470 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 ATP2C1P98194 919 aaPredicted RBP16.66■□□□□ 0.26
DDX56-208ENST00000467318 SEMA3FQ13275 785 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 SLC39A14Q15043 492 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 ARL6IP4Q66PJ3 421 aaKnown RBP16.66■□□□□ 0.26
DDX56-208ENST00000467318 GAS2L3Q86XJ1 694 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 C4orf32Q8N8J7 132 aa16.66■□□□□ 0.26
DDX56-208ENST00000467318 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
DDX56-208ENST00000467318 TRIM44Q96DX7 344 aaPredicted RBP16.66■□□□□ 0.26
DDX56-208ENST00000467318 RIT2Q99578 217 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms