RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SZT2Q5T011 3432 aa14.77□□□□□ -0.04
COL5A1-206ENST00000465877 ARVCFO00192 962 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 SORBS3O60504 671 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 CDKL5O76039 1030 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 GGPS1O95749 300 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 ICAM3P32942 547 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 PSMC6P62333 389 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 SSRP1Q08945 709 aaKnown RBP14.77□□□□□ -0.05
COL5A1-206ENST00000465877 SEMA3FQ13275 785 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 FAM126BQ8IXS8 530 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 REXO1Q8N1G1 1221 aaKnown RBP14.77□□□□□ -0.05
COL5A1-206ENST00000465877 GTF3C6Q969F1 213 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 MTG1Q9BT17 334 aaPredicted RBP14.77□□□□□ -0.05
COL5A1-206ENST00000465877 C22orf23Q9BZE7 217 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 PRO3102Q9H379 93 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 C6orf50Q9HD87 102 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 TMEM260Q9NX78 707 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 RTEL1Q9NZ71 1219 aa14.77□□□□□ -0.05
COL5A1-206ENST00000465877 GRIN2DO15399 1336 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 FOSP01100 380 aaPredicted RBP14.76□□□□□ -0.05
COL5A1-206ENST00000465877 TGFB3P10600 412 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 SREBF1P36956 1147 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 MAGEA10P43363 369 aaPredicted RBP14.76□□□□□ -0.05
COL5A1-206ENST00000465877 CDK7P50613 346 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 SP2Q02086 613 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 ITGA7Q13683 1181 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 LAMC2Q13753 1193 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 CELF3Q5SZQ8 465 aaKnown RBP14.76□□□□□ -0.05
COL5A1-206ENST00000465877 MYSM1Q5VVJ2 828 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 NLRX1Q86UT6 975 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 DHX37Q8IY37 1157 aaKnown RBP14.76□□□□□ -0.05
COL5A1-206ENST00000465877 SLC43A3Q8NBI5 491 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 PPTC7Q8NI37 304 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 GPRASP2Q96D09 838 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 TOX2Q96NM4 488 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 KIF2CQ99661 725 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 GDF15Q99988 308 aa14.76□□□□□ -0.05
COL5A1-206ENST00000465877 COLQQ9Y215 455 aaPredicted RBP14.76□□□□□ -0.05
COL5A1-206ENST00000465877 TRIP12Q14669 1992 aaPredicted RBP14.76□□□□□ -0.05
COL5A1-206ENST00000465877 SCN5AQ14524 2016 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 DCDC2CA8MYV0 355 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 SPATA31C2B4DYI2 1134 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 ADAMTS3O15072 1205 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 KPNA6O60684 536 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 ZNF286BP0CG31 522 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 HOXD8P13378 290 aaPredicted RBP14.75□□□□□ -0.05
COL5A1-206ENST00000465877 GNA11P29992 359 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 RBM25P49756 843 aaKnown RBP14.75□□□□□ -0.05
COL5A1-206ENST00000465877 MDM2Q00987 491 aaPredicted RBP14.75□□□□□ -0.05
COL5A1-206ENST00000465877 FAAP100Q0VG06 881 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 ME3Q16798 604 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 HSDL1Q3SXM5 330 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 JAKMIP3Q5VZ66 844 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 SH3RF1Q7Z6J0 888 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 SPATA33Q96N06 139 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
COL5A1-206ENST00000465877 SH3GLB2Q9NR46 395 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 TBX21Q9UL17 535 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 GTF3C3Q9Y5Q9 886 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 UBIAD1Q9Y5Z9 338 aa14.75□□□□□ -0.05
COL5A1-206ENST00000465877 TRIM43BA6NCK2 446 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 TLR3O15455 904 aaKnown RBP14.74□□□□□ -0.05
COL5A1-206ENST00000465877 F2P00734 622 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 ITGB5P18084 799 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 MTMR1Q13613 665 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 NEDD9Q14511 834 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 DGKDQ16760 1214 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 METTL7BQ6UX53 244 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 NECAB1Q8N987 351 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 BICD2Q8TD16 824 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 RASGRP4Q8TDF6 673 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 TRIM43Q96BQ3 446 aaPredicted RBP14.74□□□□□ -0.05
COL5A1-206ENST00000465877 CDHR1Q96JP9 859 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 AIFM3Q96NN9 605 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 SEZ6LQ9BYH1 1024 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 MLXIPQ9HAP2 919 aa14.74□□□□□ -0.05
COL5A1-206ENST00000465877 SIP14410 1827 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 KAT6AQ92794 2004 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 NOP56O00567 594 aaKnown RBP14.73□□□□□ -0.05
COL5A1-206ENST00000465877 KIAA0355O15063 1070 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 B4GALT4O60513 344 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 CTDNEP1O95476 244 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 CD4P01730 458 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 KCNA2P16389 499 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 ARHGAP4P98171 946 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 FAM47CQ5HY64 1035 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 MCTP2Q6DN12 878 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 CYFIP1Q7L576 1253 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 PPP1R13LQ8WUF5 828 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 CRYGNQ8WXF5 182 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 LBHD1Q9BQE6 289 aaPredicted RBP14.73□□□□□ -0.05
COL5A1-206ENST00000465877 SENP7Q9BQF6 1050 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 KATNAL1Q9BW62 490 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 BCAS3Q9H6U6 928 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 JADE2Q9NQC1 790 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 TMEM39AQ9NV64 488 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 PKD2L1Q9P0L9 805 aa14.73□□□□□ -0.05
COL5A1-206ENST00000465877 MYH9P35579 1960 aaKnown RBP14.73□□□□□ -0.05
COL5A1-206ENST00000465877 DTNBO60941 627 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 RAG1P15918 1043 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms