RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PSTPIP2Q9H939 334 aa25.08■■□□□ 1.61
LIME1-203ENST00000465591 REC8O95072 547 aa25.07■■□□□ 1.6
LIME1-203ENST00000465591 HOXD8P13378 290 aaPredicted RBP25.07■■□□□ 1.6
LIME1-203ENST00000465591 CASTP20810 708 aaKnown RBP25.07■■□□□ 1.6
LIME1-203ENST00000465591 FAM109BQ6ICB4 259 aaPredicted RBP25.07■■□□□ 1.6
LIME1-203ENST00000465591 KCNV1Q6PIU1 500 aa25.07■■□□□ 1.6
LIME1-203ENST00000465591 CTAGE1Q96RT6 745 aa25.07■■□□□ 1.6
LIME1-203ENST00000465591 IL23AQ9NPF7 189 aa25.07■■□□□ 1.6
LIME1-203ENST00000465591 SUPT20HL2P0C7V6 817 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 TGFB3P10600 412 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 ICAM3P32942 547 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 SMAD3P84022 425 aaKnown RBP25.06■■□□□ 1.6
LIME1-203ENST00000465591 PTPN11Q06124 597 aaPredicted RBP25.06■■□□□ 1.6
LIME1-203ENST00000465591 RASIP1Q5U651 963 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 PCNX4Q63HM2 1172 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 BLOC1S2Q6QNY1 142 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 BRF1Q92994 677 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 SPATA33Q96N06 139 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 TANC1Q9C0D5 1861 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 TET1Q8NFU7 2136 aa25.06■■□□□ 1.6
LIME1-203ENST00000465591 SPATA31C2B4DYI2 1134 aa25.05■■□□□ 1.6
LIME1-203ENST00000465591 F2P00734 622 aa25.05■■□□□ 1.6
LIME1-203ENST00000465591 RPS6KB1P23443 525 aa25.05■■□□□ 1.6
LIME1-203ENST00000465591 PSEN2P49810 448 aa25.05■■□□□ 1.6
LIME1-203ENST00000465591 GDF6Q6KF10 455 aaPredicted RBP25.05■■□□□ 1.6
LIME1-203ENST00000465591 FAM161BQ96MY7 647 aa25.05■■□□□ 1.6
LIME1-203ENST00000465591 NAP1L2Q9ULW6 460 aaPredicted RBP25.05■■□□□ 1.6
LIME1-203ENST00000465591 TELO2Q9Y4R8 837 aa25.05■■□□□ 1.6
LIME1-203ENST00000465591 V9GY48 417 aaPredicted RBP25.05■■□□□ 1.6
LIME1-203ENST00000465591 COL6A3P12111 3177 aa25.04■■□□□ 1.6
LIME1-203ENST00000465591 HAS3O00219 553 aa25.04■■□□□ 1.6
LIME1-203ENST00000465591 STAM2O75886 525 aa25.04■■□□□ 1.6
LIME1-203ENST00000465591 ADD1P35611 737 aaKnown RBP25.04■■□□□ 1.6
LIME1-203ENST00000465591 SESTD1Q86VW0 696 aa25.04■■□□□ 1.6
LIME1-203ENST00000465591 ALG1Q9BT22 464 aa25.04■■□□□ 1.6
LIME1-203ENST00000465591 RBAK-RBAKDNI3L0D1 243 aa25.03■■□□□ 1.6
LIME1-203ENST00000465591 RCAN1P53805 252 aa25.03■■□□□ 1.6
LIME1-203ENST00000465591 FGD1P98174 961 aa25.03■■□□□ 1.6
LIME1-203ENST00000465591 MFSD10Q14728 455 aa25.03■■□□□ 1.6
LIME1-203ENST00000465591 GNPTABQ3T906 1256 aa25.03■■□□□ 1.6
LIME1-203ENST00000465591 PSRC1Q6PGN9 363 aaPredicted RBP25.03■■□□□ 1.6
LIME1-203ENST00000465591 GUCD1Q96NT3 240 aa25.03■■□□□ 1.6
LIME1-203ENST00000465591 AGXT2Q9BYV1 514 aa25.03■■□□□ 1.6
LIME1-203ENST00000465591 MLXIPQ9HAP2 919 aa25.03■■□□□ 1.6
LIME1-203ENST00000465591 CXXC1Q9P0U4 656 aaPredicted RBP25.03■■□□□ 1.6
LIME1-203ENST00000465591 HDAC6Q9UBN7 1215 aa25.03■■□□□ 1.6
LIME1-203ENST00000465591 GBF1Q92538 1859 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 GRXCR1A8MXD5 290 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 STXBP3O00186 592 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 FIBPO43427 364 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 PPFIA4O75335 1185 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 METAP2P50579 478 aaKnown RBP eCLIP25.02■■□□□ 1.6
LIME1-203ENST00000465591 HIC1Q14526 733 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 PTGISQ16647 500 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 KIAA0753Q2KHM9 967 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 C16orf70Q9BSU1 422 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 USP26Q9BXU7 913 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 TTYH1Q9H313 450 aaPredicted RBP25.02■■□□□ 1.6
LIME1-203ENST00000465591 GTF2IRD1Q9UHL9 959 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 PCDHA6Q9UN73 950 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 PCDHA8Q9Y5H6 950 aa25.02■■□□□ 1.6
LIME1-203ENST00000465591 NAPAP54920 295 aa25.01■■□□□ 1.59
LIME1-203ENST00000465591 ZNF697Q5TEC3 545 aa25.01■■□□□ 1.59
LIME1-203ENST00000465591 ERICH6BQ5W0A0 696 aa25.01■■□□□ 1.59
LIME1-203ENST00000465591 XRRA1Q6P2D8 792 aa25.01■■□□□ 1.59
LIME1-203ENST00000465591 CYFIP1Q7L576 1253 aa25.01■■□□□ 1.59
LIME1-203ENST00000465591 FBXL16Q8N461 479 aa25.01■■□□□ 1.59
LIME1-203ENST00000465591 HERVK_113Q902F9 699 aa25.01■■□□□ 1.59
LIME1-203ENST00000465591 DHX38Q92620 1227 aaKnown RBP25.01■■□□□ 1.59
LIME1-203ENST00000465591 NID2Q14112 1375 aa25.01■■□□□ 1.59
LIME1-203ENST00000465591 HSFX4A0A1B0GTS1 333 aaPredicted RBP25■■□□□ 1.59
LIME1-203ENST00000465591 HSFX3A0A1B0GWH4 333 aaPredicted RBP25■■□□□ 1.59
LIME1-203ENST00000465591 FGBP02675 491 aa25■■□□□ 1.59
LIME1-203ENST00000465591 ITGB5P18084 799 aa25■■□□□ 1.59
LIME1-203ENST00000465591 ZNF200P98182 395 aaPredicted RBP25■■□□□ 1.59
LIME1-203ENST00000465591 OTOP2Q7RTS6 562 aa25■■□□□ 1.59
LIME1-203ENST00000465591 PGBD1Q96JS3 809 aa25■■□□□ 1.59
LIME1-203ENST00000465591 NOD1Q9Y239 953 aa25■■□□□ 1.59
LIME1-203ENST00000465591 MYO9BQ13459 2157 aa25■■□□□ 1.59
LIME1-203ENST00000465591 EPB41L2O43491 1005 aaKnown RBP24.99■■□□□ 1.59
LIME1-203ENST00000465591 ATP9AO75110 1047 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 PSMA5P28066 241 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 NEDD9Q14511 834 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 PPP1R18Q6NYC8 613 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 METTL7BQ6UX53 244 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 DEFB128Q7Z7B8 93 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 C7orf31Q8N865 590 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 KATNAL1Q9BW62 490 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 SEMA6BQ9H3T3 888 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 RIC8AQ9NPQ8 531 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 BARHL2Q9NY43 387 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 UBIAD1Q9Y5Z9 338 aa24.99■■□□□ 1.59
LIME1-203ENST00000465591 SPDYE3A6NKU9 549 aa24.98■■□□□ 1.59
LIME1-203ENST00000465591 PITPNM1O00562 1244 aa24.98■■□□□ 1.59
LIME1-203ENST00000465591 ADAMTS3O15072 1205 aa24.98■■□□□ 1.59
LIME1-203ENST00000465591 LGALS2P05162 132 aa24.98■■□□□ 1.59
LIME1-203ENST00000465591 IQCF3P0C7M6 154 aa24.98■■□□□ 1.59
LIME1-203ENST00000465591 PBX2P40425 430 aa24.98■■□□□ 1.59
LIME1-203ENST00000465591 WNT8BQ93098 351 aa24.98■■□□□ 1.59
LIME1-203ENST00000465591 GPR20Q99678 358 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms