RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PPP1R9BQ96SB3 815 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 MPHOSPH6Q99547 160 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 TINF2Q9BSI4 451 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 POLR3EQ9NVU0 708 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 DDX25Q9UHL0 483 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 STAM2O75886 525 aa19.15■□□□□ 0.66
EXOSC3-203ENST00000465229 SNAI1O95863 264 aaPredicted RBP19.15■□□□□ 0.66
EXOSC3-203ENST00000465229 IGHA2P01877 340 aa19.15■□□□□ 0.66
EXOSC3-203ENST00000465229 MSL3Q8N5Y2 521 aaKnown RBP19.15■□□□□ 0.66
EXOSC3-203ENST00000465229 C4orf32Q8N8J7 132 aa19.15■□□□□ 0.66
EXOSC3-203ENST00000465229 INPP4AQ96PE3 977 aaPredicted RBP19.15■□□□□ 0.66
EXOSC3-203ENST00000465229 WDR11Q9BZH6 1224 aa19.15■□□□□ 0.66
EXOSC3-203ENST00000465229 JADE2Q9NQC1 790 aa19.15■□□□□ 0.66
EXOSC3-203ENST00000465229 HTTP42858 3142 aa19.15■□□□□ 0.66
EXOSC3-203ENST00000465229 HSPA8P11142 646 aaKnown RBP19.14■□□□□ 0.66
EXOSC3-203ENST00000465229 PTGDRQ13258 359 aa19.14■□□□□ 0.66
EXOSC3-203ENST00000465229 ORC2Q13416 577 aaPredicted RBP19.14■□□□□ 0.66
EXOSC3-203ENST00000465229 PTPAQ15257 358 aa19.14■□□□□ 0.66
EXOSC3-203ENST00000465229 OLFML2BQ68BL8 750 aa19.14■□□□□ 0.66
EXOSC3-203ENST00000465229 EEPD1Q7L9B9 569 aa19.14■□□□□ 0.66
EXOSC3-203ENST00000465229 NIPA1Q7RTP0 329 aa19.14■□□□□ 0.66
EXOSC3-203ENST00000465229 PLA2G4DQ86XP0 818 aa19.14■□□□□ 0.66
EXOSC3-203ENST00000465229 TMEM60Q9H2L4 133 aa19.14■□□□□ 0.66
EXOSC3-203ENST00000465229 SYNGAP1Q96PV0 1343 aa19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 NEMFO60524 1076 aa19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 YEATS4O95619 227 aa19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 HSPA1AP0DMV8 641 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 HSPA1BP0DMV9 641 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 LIG1P18858 919 aa19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 IRF5Q13568 498 aa19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 SLC39A14Q15043 492 aa19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 POTEDQ86YR6 584 aa19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 LINC00301Q8NCQ3 95 aa19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 FUCA2Q9BTY2 467 aa19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.14■□□□□ 0.65
EXOSC3-203ENST00000465229 CENPFP49454 3210 aa19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 ARP10275 920 aa19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 UVSSAQ2YD98 709 aa19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 RBM43Q6ZSC3 357 aaKnown RBP19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 OTOP1Q7RTM1 612 aa19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 KATNBL1Q9H079 304 aa19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 NUP62CLQ9H1M0 184 aa19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 KCNH7Q9NS40 1196 aa19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 TRIM17Q9Y577 477 aa19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 MRVI1Q9Y6F6 885 aa19.13■□□□□ 0.65
EXOSC3-203ENST00000465229 PLXNA1Q9UIW2 1896 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 MSH4O15457 936 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 BMP15O95972 392 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 CYP2C19P33261 490 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 ATP2C1P98194 919 aaPredicted RBP19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 MTMR1Q13613 665 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 SEPT14Q6ZU15 432 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 NLRX1Q86UT6 975 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 KCNG4Q8TDN1 519 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 TRIB2Q92519 343 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 HAS1Q92839 578 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 GPRASP2Q96D09 838 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 MTMR9Q96QG7 549 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 UIMC1Q96RL1 719 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 KCNMB3Q9NPA1 279 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 CEP131Q9UPN4 1083 aa19.12■□□□□ 0.65
EXOSC3-203ENST00000465229 MAFGO15525 162 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 PRMT2P55345 433 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 SETQ01105 290 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 SEMA3FQ13275 785 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 CALCRLQ16602 461 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 GNPTABQ3T906 1256 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 FBXO16Q8IX29 292 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 ETNPPLQ8TBG4 499 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 ABHD16BQ9H3Z7 469 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 CLSTN2Q9H4D0 955 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 DACT1Q9NYF0 836 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 MCM3APO60318 1980 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 A0A1W2PQ27 194 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 A0A1W2PQ64 194 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 A0A1W2PQD8 194 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 SPATA31C2B4DYI2 1134 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 ICAM3P32942 547 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 CTCFP49711 727 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 LBX1P52954 281 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 STK38Q15208 465 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 PRAMEF19Q5SWL8 479 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 TAPT1Q6NXT6 567 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 RAET1EQ8TD07 263 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 GJA10Q969M2 543 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 VTA1Q9NP79 307 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 PDGFCQ9NRA1 345 aa19.11■□□□□ 0.65
EXOSC3-203ENST00000465229 LAD1O00515 517 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 TBX3O15119 743 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 SPTLC2O15270 562 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 ADCY3O60266 1144 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 ATP9AO75110 1047 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 OR52Z1P0C646 297 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 ELNP15502 786 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 MARCKSP29966 332 aaPredicted RBP19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 ACVR2BQ13705 512 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 ADALQ6DHV7 355 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 TRMT44Q8IYL2 757 aaKnown RBP19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 CDHR1Q96JP9 859 aa19.1■□□□□ 0.65
EXOSC3-203ENST00000465229 PDLIM2Q96JY6 352 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms