RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 ATP2B1P20020 1258 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 ECI1P42126 302 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 GRIA2P42262 883 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 INF2Q27J81 1249 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 CCDC103Q8IW40 242 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 FAM177A1Q8N128 213 aaPredicted RBP6.28□□□□□ -1.4
VPS8-217ENST00000465213 TTLL6Q8N841 843 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 USP33Q8TEY7 942 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 TMEFF2Q9UIK5 374 aaPredicted RBP6.28□□□□□ -1.4
VPS8-217ENST00000465213 SIT1Q9Y3P8 196 aa6.28□□□□□ -1.4
VPS8-217ENST00000465213 MROH6A6NGR9 719 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 FUCA1P04066 466 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 SNRPB2P08579 225 aaKnown RBP6.27□□□□□ -1.41
VPS8-217ENST00000465213 GFRA1P56159 465 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 PPP2R2AP63151 447 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 PRSS53Q2L4Q9 553 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 DENND5AQ6IQ26 1287 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 BORAQ6PGQ7 559 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 CKAP2LQ8IYA6 745 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 LOXL4Q96JB6 756 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 CCDC140Q96MF4 163 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 TRIM55Q9BYV6 548 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 INVSQ9Y283 1065 aa6.27□□□□□ -1.41
VPS8-217ENST00000465213 AGRPO00253 132 aa6.26□□□□□ -1.41
VPS8-217ENST00000465213 CPP00450 1065 aa6.26□□□□□ -1.41
VPS8-217ENST00000465213 SLC6A11P48066 632 aa6.26□□□□□ -1.41
VPS8-217ENST00000465213 IQCEQ6IPM2 695 aa6.26□□□□□ -1.41
VPS8-217ENST00000465213 FAM124AQ86V42 546 aa6.26□□□□□ -1.41
VPS8-217ENST00000465213 TMEM145Q8NBT3 493 aa6.26□□□□□ -1.41
VPS8-217ENST00000465213 DVL3Q92997 716 aaPredicted RBP6.26□□□□□ -1.41
VPS8-217ENST00000465213 C1orf159Q96HA4 380 aa6.26□□□□□ -1.41
VPS8-217ENST00000465213 AP5M1Q9H0R1 490 aa6.26□□□□□ -1.41
VPS8-217ENST00000465213 MSRB2Q9Y3D2 182 aa6.26□□□□□ -1.41
VPS8-217ENST00000465213 C9orf118A6NHY6 69 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 SGSM2O43147 1006 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 GTF2F1P35269 517 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS8-217ENST00000465213 KCNJ6P48051 423 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 ITGA1P56199 1179 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 TESK1Q15569 626 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 SLC35F1Q5T1Q4 408 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 E4F1Q66K89 784 aaPredicted RBP6.25□□□□□ -1.41
VPS8-217ENST00000465213 ZC3H18Q86VM9 953 aaKnown RBP6.25□□□□□ -1.41
VPS8-217ENST00000465213 ST13P5Q8NFI4 369 aaPredicted RBP6.25□□□□□ -1.41
VPS8-217ENST00000465213 SEC14L1Q92503 715 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 SGSM3Q96HU1 749 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 SYT3Q9BQG1 590 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 SRRDQ9UH36 339 aa6.25□□□□□ -1.41
VPS8-217ENST00000465213 RBL2Q08999 1139 aa6.24□□□□□ -1.41
VPS8-217ENST00000465213 ACBD5Q5T8D3 534 aaPredicted RBP6.24□□□□□ -1.41
VPS8-217ENST00000465213 RIOX2Q8IUF8 465 aa6.24□□□□□ -1.41
VPS8-217ENST00000465213 FAM126BQ8IXS8 530 aa6.24□□□□□ -1.41
VPS8-217ENST00000465213 Q8N1Y9 231 aa6.24□□□□□ -1.41
VPS8-217ENST00000465213 FAM26EQ8N5C1 309 aa6.24□□□□□ -1.41
VPS8-217ENST00000465213 TXNDC5Q8NBS9 432 aaKnown RBP6.24□□□□□ -1.41
VPS8-217ENST00000465213 SLC16A11Q8NCK7 471 aa6.24□□□□□ -1.41
VPS8-217ENST00000465213 RCBTB1Q8NDN9 531 aa6.24□□□□□ -1.41
VPS8-217ENST00000465213 DIO2Q92813 273 aa6.24□□□□□ -1.41
VPS8-217ENST00000465213 NGRNQ9NPE2 291 aaKnown RBP6.24□□□□□ -1.41
VPS8-217ENST00000465213 MARCH2Q9P0N8 246 aa6.24□□□□□ -1.41
VPS8-217ENST00000465213 PPP1R1BQ9UD71 204 aaPredicted RBP6.24□□□□□ -1.41
VPS8-217ENST00000465213 MEFVO15553 781 aaPredicted RBP6.23□□□□□ -1.41
VPS8-217ENST00000465213 KCNAB2Q13303 367 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 SURF1Q15526 300 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 NBPF6Q5VWK0 638 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 CD300LDQ6UXZ3 194 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 TEX2Q8IWB9 1127 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 PPIL6Q8IXY8 311 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 ARMC5Q96C12 935 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 NBPF4Q96M43 638 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 SORCS2Q96PQ0 1159 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 POLR3GLQ9BT43 218 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 IER2Q9BTL4 223 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 ARHGEF4Q9NR80 690 aa6.23□□□□□ -1.41
VPS8-217ENST00000465213 TIMM13Q9Y5L4 95 aaPredicted RBP6.23□□□□□ -1.41
VPS8-217ENST00000465213 IQCA1LA6NCM1 817 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 C22orf46C9J442 243 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
VPS8-217ENST00000465213 SUV39H1O43463 412 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 DLX3O60479 287 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 LCP1P13796 627 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 LTBRP36941 435 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 BCL6P41182 706 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 RPL11P62913 178 aaKnown RBP6.22□□□□□ -1.41
VPS8-217ENST00000465213 MAP4K2Q12851 820 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 SERINC3Q13530 473 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 HSP90AA2PQ14568 343 aaPredicted RBP6.22□□□□□ -1.41
VPS8-217ENST00000465213 MCTP2Q6DN12 878 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 GLB1LQ6UWU2 654 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 SPATC1Q76KD6 591 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 NLRP10Q86W26 655 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 CHST13Q8NET6 341 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 ZNF669Q96BR6 464 aaPredicted RBP6.22□□□□□ -1.41
VPS8-217ENST00000465213 LCORQ96JN0 433 aaPredicted RBP6.22□□□□□ -1.41
VPS8-217ENST00000465213 HIRIP3Q9BW71 556 aaPredicted RBP6.22□□□□□ -1.41
VPS8-217ENST00000465213 CCDC113Q9H0I3 377 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 BTG4Q9NY30 223 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 FBXL7Q9UJT9 491 aa6.22□□□□□ -1.41
VPS8-217ENST00000465213 TSC22D4Q9Y3Q8 395 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms