RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 MYSM1Q5VVJ2 828 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
COL11A1-207ENST00000465209 STOX1Q6ZVD7 989 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 CHD1LQ86WJ1 897 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 IL31RAQ8NI17 732 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL11A1-207ENST00000465209 PDCD2LQ9BRP1 358 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 KATNAL1Q9BW62 490 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 LMCD1Q9NZU5 365 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 MAD2L2Q9UI95 211 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 MRVI1Q9Y6F6 885 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 ABHD14A-ACY1A0A1B0GW23 586 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 LINC01553A4QN01 128 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 IGHDP01880 384 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 PLA2G5P39877 138 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 ERVK-21P61565 698 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 SP2Q02086 613 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 LAMC2Q13753 1193 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 RALGAPA2Q2PPJ7 1873 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 ZNF618Q5T7W0 954 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.37
COL11A1-207ENST00000465209 HLA-CQ95604 372 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 RAD9AQ99638 391 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 C16orf70Q9BSU1 422 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 ALG1Q9BT22 464 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 C11orf16Q9NQ32 467 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 WDFY4Q6ZS81 3184 aa12.75□□□□□ -0.37
COL11A1-207ENST00000465209 FRMPD4Q14CM0 1322 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 PALM3A6NDB9 673 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-207ENST00000465209 CFBP00751 764 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 UBA1P22314 1058 aaKnown RBP12.74□□□□□ -0.37
COL11A1-207ENST00000465209 PGM5Q15124 567 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 CELF3Q5SZQ8 465 aaKnown RBP12.74□□□□□ -0.37
COL11A1-207ENST00000465209 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 CYB5R4Q7L1T6 521 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 SERINC5Q86VE9 423 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 VSIG10LQ86VR7 867 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 C7orf31Q8N865 590 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 C1QTNF1Q9BXJ1 281 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 EPHX3Q9H6B9 360 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
COL11A1-207ENST00000465209 MAP3K20Q9NYL2 800 aaKnown RBP12.74□□□□□ -0.37
COL11A1-207ENST00000465209 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-207ENST00000465209 ZBTB5O15062 677 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 CYTH3O43739 400 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 PPFIA4O75335 1185 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 HTRA4P83105 476 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-207ENST00000465209 AAMPQ13685 434 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 IMMTQ16891 758 aaKnown RBP12.73□□□□□ -0.37
COL11A1-207ENST00000465209 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL11A1-207ENST00000465209 DHX37Q8IY37 1157 aaKnown RBP12.73□□□□□ -0.37
COL11A1-207ENST00000465209 SP7Q8TDD2 431 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-207ENST00000465209 TGS1Q96RS0 853 aaKnown RBP12.73□□□□□ -0.37
COL11A1-207ENST00000465209 OSBPL7Q9BZF2 842 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 KRT23Q9C075 422 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 BCAS3Q9H6U6 928 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 CD320Q9NPF0 282 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 DIAPH3Q9NSV4 1193 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 TRIOO75962 3097 aa12.73□□□□□ -0.37
COL11A1-207ENST00000465209 KLRF2D3W0D1 207 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 HIP1O00291 1037 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 EFCAB14O75071 495 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 LGR5O75473 907 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 GGPS1O95749 300 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 HOXA13P31271 388 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-207ENST00000465209 SEMA3FQ13275 785 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 PLEKHG4Q58EX7 1191 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 IFIT1BQ5T764 474 aaKnown RBP12.72□□□□□ -0.37
COL11A1-207ENST00000465209 SAMD3Q8N6K7 520 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 C17orf80Q9BSJ5 609 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 LRFN3Q9BTN0 628 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 RIOX1Q9H6W3 641 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 CNNM2Q9H8M5 875 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 SENP2Q9HC62 589 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 MTUS1Q9ULD2 1270 aa12.72□□□□□ -0.37
COL11A1-207ENST00000465209 EMSYQ7Z589 1322 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 DHX16O60231 1041 aaKnown RBP12.71□□□□□ -0.37
COL11A1-207ENST00000465209 SORBS3O60504 671 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 TGFB3P10600 412 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 MYCLP12524 364 aaPredicted RBP12.71□□□□□ -0.37
COL11A1-207ENST00000465209 MRPS9P82933 396 aaKnown RBP12.71□□□□□ -0.37
COL11A1-207ENST00000465209 IKBKEQ14164 716 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 GRM4Q14833 912 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 KCNV1Q6PIU1 500 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 DBF4BQ8NFT6 615 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
COL11A1-207ENST00000465209 SPATA33Q96N06 139 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 UBAC1Q9BSL1 405 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 ZBED2Q9BTP6 218 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 UBE2ZQ9H832 354 aaPredicted RBP12.71□□□□□ -0.37
COL11A1-207ENST00000465209 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 TAF6LQ9Y6J9 622 aa12.71□□□□□ -0.37
COL11A1-207ENST00000465209 MYO7AQ13402 2215 aa12.7□□□□□ -0.38
COL11A1-207ENST00000465209 LGALS2P05162 132 aa12.7□□□□□ -0.38
COL11A1-207ENST00000465209 GSPT1P15170 499 aaKnown RBP12.7□□□□□ -0.38
COL11A1-207ENST00000465209 ICAM3P32942 547 aa12.7□□□□□ -0.38
COL11A1-207ENST00000465209 ADAM17P78536 824 aa12.7□□□□□ -0.38
COL11A1-207ENST00000465209 TROAPQ12815 778 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms