RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 SPATA33Q96N06 139 aa26.41■■□□□ 1.82
USP42-205ENST00000465073 PIGSQ96S52 555 aa26.41■■□□□ 1.82
USP42-205ENST00000465073 CERS4Q9HA82 394 aa26.41■■□□□ 1.82
USP42-205ENST00000465073 CXCL10P02778 98 aa26.4■■□□□ 1.82
USP42-205ENST00000465073 CCND2P30279 289 aa26.4■■□□□ 1.82
USP42-205ENST00000465073 CNKSR3Q6P9H4 555 aa26.4■■□□□ 1.82
USP42-205ENST00000465073 MTCH2Q9Y6C9 303 aa26.4■■□□□ 1.82
USP42-205ENST00000465073 TET1Q8NFU7 2136 aa26.39■■□□□ 1.82
USP42-205ENST00000465073 PNMA6FA0A0J9YX94 578 aa26.39■■□□□ 1.82
USP42-205ENST00000465073 RFXAPO00287 272 aa26.39■■□□□ 1.82
USP42-205ENST00000465073 TLL1O43897 1013 aa26.39■■□□□ 1.82
USP42-205ENST00000465073 WDR5P61964 334 aaKnown RBP26.39■■□□□ 1.82
USP42-205ENST00000465073 WTAPQ15007 396 aa26.39■■□□□ 1.82
USP42-205ENST00000465073 NCOA7Q8NI08 942 aa26.39■■□□□ 1.82
USP42-205ENST00000465073 IL31RAQ8NI17 732 aa26.39■■□□□ 1.82
USP42-205ENST00000465073 ADAMTS19Q8TE59 1207 aa26.39■■□□□ 1.82
USP42-205ENST00000465073 NBNO60934 754 aa26.38■■□□□ 1.81
USP42-205ENST00000465073 GGPS1O95749 300 aa26.38■■□□□ 1.81
USP42-205ENST00000465073 TROAPQ12815 778 aa26.38■■□□□ 1.81
USP42-205ENST00000465073 HSDL1Q3SXM5 330 aa26.38■■□□□ 1.81
USP42-205ENST00000465073 ARNTL2Q8WYA1 636 aa26.38■■□□□ 1.81
USP42-205ENST00000465073 SENP2Q9HC62 589 aa26.38■■□□□ 1.81
USP42-205ENST00000465073 TRANK1O15050 2925 aa26.38■■□□□ 1.81
USP42-205ENST00000465073 TRIP12Q14669 1992 aaPredicted RBP26.38■■□□□ 1.81
USP42-205ENST00000465073 ABHD14A-ACY1A0A1B0GW23 586 aa26.37■■□□□ 1.81
USP42-205ENST00000465073 E7EWF7 191 aa26.37■■□□□ 1.81
USP42-205ENST00000465073 CYTH3O43739 400 aa26.37■■□□□ 1.81
USP42-205ENST00000465073 SP2Q02086 613 aa26.37■■□□□ 1.81
USP42-205ENST00000465073 AAK1Q2M2I8 961 aa26.37■■□□□ 1.81
USP42-205ENST00000465073 TRIM71Q2Q1W2 868 aaKnown RBP26.37■■□□□ 1.81
USP42-205ENST00000465073 FCHSD1Q86WN1 690 aa26.37■■□□□ 1.81
USP42-205ENST00000465073 SUPT16HQ9Y5B9 1047 aaKnown RBP26.37■■□□□ 1.81
USP42-205ENST00000465073 EPOPA6NHQ4 379 aa26.36■■□□□ 1.81
USP42-205ENST00000465073 EFCAB14O75071 495 aa26.36■■□□□ 1.81
USP42-205ENST00000465073 ARHGEF15O94989 841 aa26.36■■□□□ 1.81
USP42-205ENST00000465073 UBA1P22314 1058 aaKnown RBP26.36■■□□□ 1.81
USP42-205ENST00000465073 CATIPQ7Z7H3 387 aa26.36■■□□□ 1.81
USP42-205ENST00000465073 ZBED2Q9BTP6 218 aa26.36■■□□□ 1.81
USP42-205ENST00000465073 MLXIPQ9HAP2 919 aa26.36■■□□□ 1.81
USP42-205ENST00000465073 SORBS3O60504 671 aa26.36■■□□□ 1.81
USP42-205ENST00000465073 UHRF1Q96T88 793 aaPredicted RBP26.36■■□□□ 1.81
USP42-205ENST00000465073 C16orf70Q9BSU1 422 aa26.36■■□□□ 1.81
USP42-205ENST00000465073 TAF6LQ9Y6J9 622 aa26.36■■□□□ 1.81
USP42-205ENST00000465073 SGSM2O43147 1006 aa26.35■■□□□ 1.81
USP42-205ENST00000465073 STAM2O75886 525 aa26.35■■□□□ 1.81
USP42-205ENST00000465073 ZNF200P98182 395 aaPredicted RBP26.35■■□□□ 1.81
USP42-205ENST00000465073 IKBKEQ14164 716 aa26.35■■□□□ 1.81
USP42-205ENST00000465073 SKIV2LQ15477 1246 aaKnown RBP26.35■■□□□ 1.81
USP42-205ENST00000465073 ZNF618Q5T7W0 954 aa26.35■■□□□ 1.81
USP42-205ENST00000465073 TRAF7Q6Q0C0 670 aa26.35■■□□□ 1.81
USP42-205ENST00000465073 PRRC2BQ5JSZ5 2229 aaKnown RBP26.34■■□□□ 1.81
USP42-205ENST00000465073 GNPTABQ3T906 1256 aa26.34■■□□□ 1.81
USP42-205ENST00000465073 IGDCC4Q8TDY8 1250 aa26.34■■□□□ 1.81
USP42-205ENST00000465073 NCOR1O75376 2440 aa26.33■■□□□ 1.81
USP42-205ENST00000465073 DEFB103AP81534 67 aa26.33■■□□□ 1.81
USP42-205ENST00000465073 SERINC5Q86VE9 423 aa26.33■■□□□ 1.81
USP42-205ENST00000465073 GPKOWQ92917 476 aaPredicted RBP eCLIP26.33■■□□□ 1.81
USP42-205ENST00000465073 MAP4K1Q92918 833 aa26.33■■□□□ 1.81
USP42-205ENST00000465073 WNT8BQ93098 351 aa26.33■■□□□ 1.81
USP42-205ENST00000465073 ZFP91Q96JP5 570 aaPredicted RBP26.33■■□□□ 1.81
USP42-205ENST00000465073 MAP3K14Q99558 947 aa26.33■■□□□ 1.81
USP42-205ENST00000465073 RAD9AQ99638 391 aa26.33■■□□□ 1.81
USP42-205ENST00000465073 EMSYQ7Z589 1322 aa26.33■■□□□ 1.8
USP42-205ENST00000465073 MYH7BA7E2Y1 1941 aa26.32■■□□□ 1.8
USP42-205ENST00000465073 MUC3AQ02505 3323 aa26.32■■□□□ 1.8
USP42-205ENST00000465073 H3BRB1 525 aa26.32■■□□□ 1.8
USP42-205ENST00000465073 BMP1P13497 986 aa26.32■■□□□ 1.8
USP42-205ENST00000465073 HIC1Q14526 733 aa26.32■■□□□ 1.8
USP42-205ENST00000465073 TCTN1Q2MV58 587 aa26.32■■□□□ 1.8
USP42-205ENST00000465073 TMCO2Q7Z6W1 182 aaPredicted RBP26.32■■□□□ 1.8
USP42-205ENST00000465073 TUT1Q9H6E5 874 aaKnown RBP26.32■■□□□ 1.8
USP42-205ENST00000465073 BAZ2BQ9UIF8 2168 aaKnown RBP26.32■■□□□ 1.8
USP42-205ENST00000465073 FRMPD4Q14CM0 1322 aa26.32■■□□□ 1.8
USP42-205ENST00000465073 GJB5O95377 273 aa26.31■■□□□ 1.8
USP42-205ENST00000465073 ICAM3P32942 547 aa26.31■■□□□ 1.8
USP42-205ENST00000465073 ANTXR2P58335 489 aa26.31■■□□□ 1.8
USP42-205ENST00000465073 MRPS9P82933 396 aaKnown RBP26.31■■□□□ 1.8
USP42-205ENST00000465073 TFF2Q03403 129 aa26.31■■□□□ 1.8
USP42-205ENST00000465073 GRB10Q13322 594 aa26.31■■□□□ 1.8
USP42-205ENST00000465073 MBTPS1Q14703 1052 aa26.31■■□□□ 1.8
USP42-205ENST00000465073 MB21D2Q8IYB1 491 aaPredicted RBP26.31■■□□□ 1.8
USP42-205ENST00000465073 INPP4AQ96PE3 977 aaPredicted RBP26.31■■□□□ 1.8
USP42-205ENST00000465073 COG5Q9UP83 839 aa26.31■■□□□ 1.8
USP42-205ENST00000465073 C17orf102A2RUQ5 167 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 LCHNA4D1U4 455 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 SPATA31C2B4DYI2 1134 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 NOP56O00567 594 aaKnown RBP26.3■■□□□ 1.8
USP42-205ENST00000465073 LGR5O75473 907 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 NEDD9Q14511 834 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 KRT40Q6A162 431 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 SPZ1Q9BXG8 430 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 RSPH10B2B2RC85 870 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 LGALS2P05162 132 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 RSPH10BP0C881 870 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 SMARCA1P28370 1054 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 KIF5BP33176 963 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 THPOP40225 353 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 METTL7BQ6UX53 244 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 PIBF1Q8WXW3 757 aa26.3■■□□□ 1.8
USP42-205ENST00000465073 ATP6V0A1Q93050 837 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms