RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CCDC40Q4G0X9 1142 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 CCDC24Q8N4L8 307 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 TBCKQ8TEA7 893 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 RUBCNQ92622 972 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 INPP4AQ96PE3 977 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 PNMA5Q96PV4 448 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 KCNK3O14649 394 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 ADAMTS2O95450 1211 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 HSD17B3P37058 310 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 INTS5Q6P9B9 1019 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 FAM133AQ8N9E0 248 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 CYFIP2Q96F07 1278 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 LSM14BQ9BX40 385 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 CNOT8Q9UFF9 292 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 PLCH1Q4KWH8 1693 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 GRID2IPA4D2P6 1211 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 DNM1LO00429 736 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 PDHBP11177 359 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 RAPGEF1Q13905 1077 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 GRM4Q14833 912 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 USP17L2Q6R6M4 530 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 SLC40A1Q9NP59 571 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 CACNA1SQ13698 1873 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 KLRF2D3W0D1 207 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 FAM107AO95990 144 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 PCP11498 1178 aaKnown RBP13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 ECHS1P30084 290 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 PRPHP41219 470 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 AMPD3Q01432 767 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 NAB2Q15742 525 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 SLC9C1Q4G0N8 1177 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 MEI1Q5TIA1 1274 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 SFMBT2Q5VUG0 894 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 NELFCDQ8IXH7 590 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 RNF10Q8N5U6 811 aaKnown RBP13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 OSBPL7Q9BZF2 842 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 CUEDC2Q9H467 287 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 VCPKMTQ9H867 229 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 TMBIM4Q9HC24 238 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 DDX20Q9UHI6 824 aaKnown RBP13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 LRP5O75197 1615 aa13.86□□□□□ -0.19
CLCNKA-204ENST00000464764 TRAF5O00463 557 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 CAMTA2O94983 1202 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 NONOQ15233 471 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 ERFEQ4G0M1 354 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 BICDL1Q6ZP65 573 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 TXNRD3Q86VQ6 643 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 DDX12PQ92771 950 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 TMEM47Q9BQJ4 181 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 ZNF142P52746 1687 aaPredicted RBP13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 SETQ01105 290 aaPredicted RBP13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 ECM1Q16610 540 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 ODF2Q5BJF6 829 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 C6orf89Q6UWU4 347 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 USP38Q8NB14 1042 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 CCDC114Q96M63 670 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 AK8Q96MA6 479 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 UBA5Q9GZZ9 404 aa13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 DDX47Q9H0S4 455 aaKnown RBP13.85□□□□□ -0.19
CLCNKA-204ENST00000464764 SLC37A4O43826 429 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 CEP104O60308 925 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 RASSF9O75901 435 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 ECM2O94769 699 aaPredicted RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 CRKLP46109 303 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 MICALCLQ6ZW33 695 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 UNC13DQ70J99 1090 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 NEK8Q86SG6 692 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 CEP57Q86XR8 500 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 CD302Q8IX05 232 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 MREGQ8N565 214 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 LARP4BQ92615 738 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 ATP8A2Q9NTI2 1148 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 SAP30BPQ9UHR5 308 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 SSU72P8A0A1W2PR75 194 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 A6NNZ2 444 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 PHF20L1A8MW92 1017 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 H0YGN5 161 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 LAD1O00515 517 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 TDP2O95551 362 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 ACTN1P12814 892 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 ITGA4P13612 1032 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 ZNF844Q08AG5 666 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 TUBB8Q3ZCM7 444 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 DGKHQ86XP1 1220 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 HAUS2Q9NVX0 235 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 NFS1Q9Y697 457 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 ARAP2Q8WZ64 1704 aa13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 HMGB1P1B2RPK0 211 aaPredicted RBP13.84□□□□□ -0.19
CLCNKA-204ENST00000464764 GCOM1H8Y6P7 765 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms