RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 NAP1L2Q9ULW6 460 aaPredicted RBP18.68■□□□□ 0.58
SSNA1-204ENST00000464553 hCG_1642624A0A1W2PR95 340 aa18.67■□□□□ 0.58
SSNA1-204ENST00000464553 ESYT2A0FGR8 921 aa18.67■□□□□ 0.58
SSNA1-204ENST00000464553 IFNAR1P17181 557 aa18.67■□□□□ 0.58
SSNA1-204ENST00000464553 NAPAP54920 295 aa18.67■□□□□ 0.58
SSNA1-204ENST00000464553 AKAP17AQ02040 695 aaKnown RBP18.67■□□□□ 0.58
SSNA1-204ENST00000464553 PPIGQ13427 754 aaKnown RBP eCLIP18.67■□□□□ 0.58
SSNA1-204ENST00000464553 NBPF20Q3BBV1 942 aa18.67■□□□□ 0.58
SSNA1-204ENST00000464553 FAM177A1Q8N128 213 aaPredicted RBP18.67■□□□□ 0.58
SSNA1-204ENST00000464553 IL17RAQ96F46 866 aa18.67■□□□□ 0.58
SSNA1-204ENST00000464553 RNF26Q9BY78 433 aaPredicted RBP18.67■□□□□ 0.58
SSNA1-204ENST00000464553 MLXIPQ9HAP2 919 aa18.67■□□□□ 0.58
SSNA1-204ENST00000464553 PCDHA6Q9UN73 950 aa18.67■□□□□ 0.58
SSNA1-204ENST00000464553 PCDHA8Q9Y5H6 950 aa18.67■□□□□ 0.58
SSNA1-204ENST00000464553 STXBP3O00186 592 aa18.66■□□□□ 0.58
SSNA1-204ENST00000464553 GGPS1O95749 300 aa18.66■□□□□ 0.58
SSNA1-204ENST00000464553 SCG2P13521 617 aa18.66■□□□□ 0.58
SSNA1-204ENST00000464553 ITGB8P26012 769 aa18.66■□□□□ 0.58
SSNA1-204ENST00000464553 ADCY7P51828 1080 aa18.66■□□□□ 0.58
SSNA1-204ENST00000464553 PSMC6P62333 389 aa18.66■□□□□ 0.58
SSNA1-204ENST00000464553 SP2Q02086 613 aa18.66■□□□□ 0.58
SSNA1-204ENST00000464553 AP3B2Q13367 1082 aa18.66■□□□□ 0.58
SSNA1-204ENST00000464553 GPKOWQ92917 476 aaPredicted RBP eCLIP18.66■□□□□ 0.58
SSNA1-204ENST00000464553 SPATA33Q96N06 139 aa18.66■□□□□ 0.58
SSNA1-204ENST00000464553 KIAA1217Q5T5P2 1943 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 SMCO2A6NFE2 343 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 B4GALT4O60513 344 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 UBA1P22314 1058 aaKnown RBP18.65■□□□□ 0.58
SSNA1-204ENST00000464553 TOB2Q14106 344 aaPredicted RBP18.65■□□□□ 0.58
SSNA1-204ENST00000464553 NTRK3Q16288 839 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 METTL7BQ6UX53 244 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 ZMYND12Q9H0C1 365 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 TRPV6Q9H1D0 765 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 HIPK3Q9H422 1215 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 PDRG1Q9NUG6 133 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 UBIAD1Q9Y5Z9 338 aa18.65■□□□□ 0.58
SSNA1-204ENST00000464553 HAS3O00219 553 aa18.64■□□□□ 0.57
SSNA1-204ENST00000464553 F2P00734 622 aa18.64■□□□□ 0.57
SSNA1-204ENST00000464553 GNA11P29992 359 aa18.64■□□□□ 0.57
SSNA1-204ENST00000464553 ANKRD1Q15327 319 aa18.64■□□□□ 0.57
SSNA1-204ENST00000464553 HSDL1Q3SXM5 330 aa18.64■□□□□ 0.57
SSNA1-204ENST00000464553 CPLX2Q6PUV4 134 aaKnown RBP18.64■□□□□ 0.57
SSNA1-204ENST00000464553 KAT2BQ92831 832 aa18.64■□□□□ 0.57
SSNA1-204ENST00000464553 NOC4LQ9BVI4 516 aaKnown RBP18.64■□□□□ 0.57
SSNA1-204ENST00000464553 C6orf50Q9HD87 102 aa18.64■□□□□ 0.57
SSNA1-204ENST00000464553 SH3GLB2Q9NR46 395 aa18.64■□□□□ 0.57
SSNA1-204ENST00000464553 RTEL1Q9NZ71 1219 aa18.64■□□□□ 0.57
SSNA1-204ENST00000464553 SHHQ15465 462 aa18.63■□□□□ 0.57
SSNA1-204ENST00000464553 TYW1BQ6NUM6 668 aa18.63■□□□□ 0.57
SSNA1-204ENST00000464553 TRIM22Q8IYM9 498 aa18.63■□□□□ 0.57
SSNA1-204ENST00000464553 RPUSD2Q8IZ73 545 aaKnown RBP18.63■□□□□ 0.57
SSNA1-204ENST00000464553 BICD2Q8TD16 824 aa18.63■□□□□ 0.57
SSNA1-204ENST00000464553 JADE2Q9NQC1 790 aa18.63■□□□□ 0.57
SSNA1-204ENST00000464553 DNAH12Q6ZR08 3092 aa18.63■□□□□ 0.57
SSNA1-204ENST00000464553 TRIOBPQ9H2D6 2365 aa18.63■□□□□ 0.57
SSNA1-204ENST00000464553 LTBP2Q14767 1821 aa18.63■□□□□ 0.57
SSNA1-204ENST00000464553 PITPNM1O00562 1244 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 NOP56O00567 594 aaKnown RBP18.62■□□□□ 0.57
SSNA1-204ENST00000464553 CLK2P49760 499 aaKnown RBP18.62■□□□□ 0.57
SSNA1-204ENST00000464553 PSEN2P49810 448 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 BFSP2Q13515 415 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 PKN1Q16512 942 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 UBE2SQ16763 222 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 FAM47CQ5HY64 1035 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 FAM109BQ6ICB4 259 aaPredicted RBP18.62■□□□□ 0.57
SSNA1-204ENST00000464553 CCDC155Q8N6L0 562 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 C7orf31Q8N865 590 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 CCDC148Q8NFR7 591 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 SCN10AQ9Y5Y9 1956 aa18.62■□□□□ 0.57
SSNA1-204ENST00000464553 CPLX1O14810 134 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 PARNO95453 639 aaKnown RBP18.61■□□□□ 0.57
SSNA1-204ENST00000464553 PFKMP08237 780 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 ITGB5P18084 799 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 RFC2P35250 354 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 SREBF1P36956 1147 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 SEMA3FQ13275 785 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 MTMR1Q13613 665 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 PSRC1Q6PGN9 363 aaPredicted RBP18.61■□□□□ 0.57
SSNA1-204ENST00000464553 CYFIP1Q7L576 1253 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 NIPA1Q7RTP0 329 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 RETREG2Q8NC44 543 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 MXRA8Q9BRK3 442 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 C16orf70Q9BSU1 422 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
SSNA1-204ENST00000464553 IL23AQ9NPF7 189 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 TRMT13Q9NUP7 481 aaKnown RBP18.61■□□□□ 0.57
SSNA1-204ENST00000464553 NOD1Q9Y239 953 aa18.61■□□□□ 0.57
SSNA1-204ENST00000464553 H3BRB1 525 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 SOX1O00570 391 aaPredicted RBP18.6■□□□□ 0.57
SSNA1-204ENST00000464553 CSF2RAP15509 400 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 CYP2C18P33260 490 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 SMAD3P84022 425 aaKnown RBP18.6■□□□□ 0.57
SSNA1-204ENST00000464553 SSRP1Q08945 709 aaKnown RBP18.6■□□□□ 0.57
SSNA1-204ENST00000464553 MFSD10Q14728 455 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 PTGISQ16647 500 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 KIAA0753Q2KHM9 967 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 C9orf50Q5SZB4 431 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 CAGE1Q8TC20 777 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 ZFP91Q96JP5 570 aaPredicted RBP18.6■□□□□ 0.57
SSNA1-204ENST00000464553 GPR20Q99678 358 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms