RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 HOXD8P13378 290 aaPredicted RBP20.25■□□□□ 0.83
VPS52-214ENST00000463486 PURAQ00577 322 aaKnown RBP20.25■□□□□ 0.83
VPS52-214ENST00000463486 CELF3Q5SZQ8 465 aaKnown RBP20.25■□□□□ 0.83
VPS52-214ENST00000463486 FAM177A1Q8N128 213 aaPredicted RBP20.25■□□□□ 0.83
VPS52-214ENST00000463486 CYP2W1Q8TAV3 490 aa20.25■□□□□ 0.83
VPS52-214ENST00000463486 AFG1LQ8WV93 481 aa20.25■□□□□ 0.83
VPS52-214ENST00000463486 STARD7Q9NQZ5 370 aa20.25■□□□□ 0.83
VPS52-214ENST00000463486 GJB4Q9NTQ9 266 aa20.25■□□□□ 0.83
VPS52-214ENST00000463486 FIBPO43427 364 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 JAK2O60674 1132 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 CD2BP2O95400 341 aaKnown RBP20.24■□□□□ 0.83
VPS52-214ENST00000463486 GNA11P29992 359 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 CPT1AP50416 773 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 TRIM60Q495X7 471 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 PRPF38BQ5VTL8 546 aaKnown RBP20.24■□□□□ 0.83
VPS52-214ENST00000463486 C7orf61Q8IZ16 206 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 REXO1Q8N1G1 1221 aaKnown RBP20.24■□□□□ 0.83
VPS52-214ENST00000463486 CCDC148Q8NFR7 591 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 RASGRP4Q8TDF6 673 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 GPRASP2Q96D09 838 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 GLT1D1Q96MS3 346 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 UPF2Q9HAU5 1272 aaKnown RBP20.24■□□□□ 0.83
VPS52-214ENST00000463486 JADE2Q9NQC1 790 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 TELO2Q9Y4R8 837 aa20.24■□□□□ 0.83
VPS52-214ENST00000463486 ATP9AO75110 1047 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 CABYRO75952 493 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 GGPS1O95749 300 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 MMP3P08254 477 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 CYP3A4P08684 503 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 TLE2Q04725 743 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 LAMC2Q13753 1193 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 HSDL1Q3SXM5 330 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 GNPTABQ3T906 1256 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 ANKRD33Q7Z3H0 272 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 DAGLBQ8NCG7 672 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 SENP7Q9BQF6 1050 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 PHF20Q9BVI0 1012 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 PCDH10Q9P2E7 1040 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 ORC3Q9UBD5 711 aaPredicted RBP20.23■□□□□ 0.83
VPS52-214ENST00000463486 PCDHA4Q9UN74 947 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 NR2E3Q9Y5X4 410 aa20.23■□□□□ 0.83
VPS52-214ENST00000463486 MEIS1O00470 390 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 ZEB2O60315 1214 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 KCNA2P16389 499 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 NLRP5P59047 1200 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 ARHGAP4P98171 946 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 MCTP2Q6DN12 878 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 DHX37Q8IY37 1157 aaKnown RBP20.22■□□□□ 0.83
VPS52-214ENST00000463486 PPTC7Q8NI37 304 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 BICD2Q8TD16 824 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 KAT2BQ92831 832 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 ZSCAN31Q96LW9 406 aaPredicted RBP20.22■□□□□ 0.83
VPS52-214ENST00000463486 MXRA8Q9BRK3 442 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 KCNJ14Q9UNX9 436 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 ATP11BQ9Y2G3 1177 aa20.22■□□□□ 0.83
VPS52-214ENST00000463486 SCN10AQ9Y5Y9 1956 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 FAM86B1E9PN63 330 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 ARVCFO00192 962 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 FAM86B2P0C5J1 330 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 PSMC6P62333 389 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 CEP55Q53EZ4 464 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 NLRX1Q86UT6 975 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 IL27Q8NEV9 243 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 TOX2Q96NM4 488 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 EHMT1Q9H9B1 1298 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 POLR3EQ9NVU0 708 aa20.21■□□□□ 0.83
VPS52-214ENST00000463486 MYH7BA7E2Y1 1941 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 IGLV3-22A0A075B6J6 115 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 A0A0U1RQG5 324 aaPredicted RBP20.2■□□□□ 0.82
VPS52-214ENST00000463486 MAFGO15525 162 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 SORBS3O60504 671 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 KPNA6O60684 536 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 MYL3P08590 195 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 ARP10275 920 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 GALNT17Q6IS24 598 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 METTL7BQ6UX53 244 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 CCDC83Q8IWF9 413 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 MTG1Q9BT17 334 aaPredicted RBP20.2■□□□□ 0.82
VPS52-214ENST00000463486 KCNH7Q9NS40 1196 aa20.2■□□□□ 0.82
VPS52-214ENST00000463486 ZMYND8Q9ULU4 1186 aaPredicted RBP20.2■□□□□ 0.82
VPS52-214ENST00000463486 TRIM43BA6NCK2 446 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 PPFIA4O75335 1185 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 FAAP100Q0VG06 881 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 MTMR1Q13613 665 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 ITGA7Q13683 1181 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 NEDD9Q14511 834 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 BRDTQ58F21 947 aaPredicted RBP20.19■□□□□ 0.82
VPS52-214ENST00000463486 CYFIP1Q7L576 1253 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 SH3RF1Q7Z6J0 888 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 FAM126BQ8IXS8 530 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 BLIDQ8IZY5 108 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 TRIM43Q96BQ3 446 aaPredicted RBP20.19■□□□□ 0.82
VPS52-214ENST00000463486 CDHR1Q96JP9 859 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 SPATA33Q96N06 139 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 LLPHQ9BRT6 129 aaKnown RBP20.19■□□□□ 0.82
VPS52-214ENST00000463486 ALG1Q9BT22 464 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 PRO3102Q9H379 93 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 PDLIM7Q9NR12 457 aa20.19■□□□□ 0.82
VPS52-214ENST00000463486 SH2B1Q9NRF2 756 aaPredicted RBP20.19■□□□□ 0.82
VPS52-214ENST00000463486 CD4P01730 458 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms