RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 MAFGO15525 162 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 HOXD8P13378 290 aaPredicted RBP14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 BMP8BP34820 402 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 RBM25P49756 843 aaKnown RBP14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 TLE2Q04725 743 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 PTPN11Q06124 597 aaPredicted RBP14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 NEDD9Q14511 834 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 UBE2SQ16763 222 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 LY6KQ17RY6 165 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 CELF3Q5SZQ8 465 aaKnown RBP14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 CXCL17Q6UXB2 119 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 PHKBQ93100 1093 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 VTI1AQ96AJ9 217 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 SENP7Q9BQF6 1050 aa14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 UPF2Q9HAU5 1272 aaKnown RBP14.96□□□□□ -0.01
R3HDM1-213ENST00000463230 KIAA0355O15063 1070 aa14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 CLTBP09497 229 aa14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 NEK4P51957 841 aa14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 IRX5P78411 483 aaPredicted RBP14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 GALNT17Q6IS24 598 aa14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 DHX37Q8IY37 1157 aaKnown RBP14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 COPS5Q92905 334 aa14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 PDLIM7Q9NR12 457 aa14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 TPCN1Q9ULQ1 816 aa14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 UBIAD1Q9Y5Z9 338 aa14.96□□□□□ -0.02
R3HDM1-213ENST00000463230 LTBP2Q14767 1821 aa14.95□□□□□ -0.02
R3HDM1-213ENST00000463230 MMP3P08254 477 aa14.95□□□□□ -0.02
R3HDM1-213ENST00000463230 UBA1P22314 1058 aaKnown RBP14.95□□□□□ -0.02
R3HDM1-213ENST00000463230 SREBF1P36956 1147 aa14.95□□□□□ -0.02
R3HDM1-213ENST00000463230 ITGA7Q13683 1181 aa14.95□□□□□ -0.02
R3HDM1-213ENST00000463230 DGKDQ16760 1214 aa14.95□□□□□ -0.02
R3HDM1-213ENST00000463230 ANO3Q9BYT9 981 aa14.95□□□□□ -0.02
R3HDM1-213ENST00000463230 PRO3102Q9H379 93 aa14.95□□□□□ -0.02
R3HDM1-213ENST00000463230 ZMYND8Q9ULU4 1186 aaPredicted RBP14.95□□□□□ -0.02
R3HDM1-213ENST00000463230 MYL3P08590 195 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 SCRN1Q12765 414 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 MYSM1Q5VVJ2 828 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 NIPA1Q7RTP0 329 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 REXO1Q8N1G1 1221 aaKnown RBP14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 AFG1LQ8WV93 481 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 GDF15Q99988 308 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 C22orf23Q9BZE7 217 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 MYH7BA7E2Y1 1941 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 NFRKBQ6P4R8 1299 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 FAM126BQ8IXS8 530 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 WASF1Q92558 559 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 LBHD1Q9BQE6 289 aaPredicted RBP14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 KATNAL1Q9BW62 490 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 JADE2Q9NQC1 790 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 BRCA2P51587 3418 aa14.94□□□□□ -0.02
R3HDM1-213ENST00000463230 PQBP1O60828 265 aaKnown RBP14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 PPFIA4O75335 1185 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 GGPS1O95749 300 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 STK3Q13188 491 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 METTL7BQ6UX53 244 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 SESTD1Q86VW0 696 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 CEP290O15078 2479 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 CD4P01730 458 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 CYP3A4P08684 503 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 PTGS1P23219 599 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 FAAP100Q0VG06 881 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 SEMA3FQ13275 785 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 DAGLBQ8NCG7 672 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 BBXQ8WY36 941 aaPredicted RBP14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 GTF3C6Q969F1 213 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 SPATA33Q96N06 139 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 MLXIPQ9HAP2 919 aa14.93□□□□□ -0.02
R3HDM1-213ENST00000463230 SUPT20HL2P0C7V6 817 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 XBP1P17861 261 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 MXRA8Q9BRK3 442 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 RTEL1Q9NZ71 1219 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 TBX21Q9UL17 535 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 GRIN2DO15399 1336 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 MAGEA10P43363 369 aaPredicted RBP14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 SP2Q02086 613 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 MTMR1Q13613 665 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 RABEP1Q15276 862 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 ZSCAN31Q96LW9 406 aaPredicted RBP14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 LARP6Q9BRS8 491 aaKnown RBP14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 TMEM39AQ9NV64 488 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 LIMCH1Q9UPQ0 1083 aa14.92□□□□□ -0.02
R3HDM1-213ENST00000463230 F2P00734 622 aa14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 SYN1P17600 705 aa14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 ITGB5P18084 799 aa14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 NLRP5P59047 1200 aa14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 ARHGAP4P98171 946 aa14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 CEP55Q53EZ4 464 aa14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 CRYGNQ8WXF5 182 aa14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 PRDM5Q9NQX1 630 aaPredicted RBP14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 VPS54Q9P1Q0 977 aa14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 PCDHA4Q9UN74 947 aa14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 COLQQ9Y215 455 aaPredicted RBP14.91□□□□□ -0.02
R3HDM1-213ENST00000463230 TRIM43BA6NCK2 446 aa14.9□□□□□ -0.02
R3HDM1-213ENST00000463230 NFASCO94856 1347 aa14.9□□□□□ -0.02
R3HDM1-213ENST00000463230 ME3Q16798 604 aa14.9□□□□□ -0.02
R3HDM1-213ENST00000463230 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
R3HDM1-213ENST00000463230 KIF2CQ99661 725 aa14.9□□□□□ -0.02
R3HDM1-213ENST00000463230 SH2B1Q9NRF2 756 aaPredicted RBP14.9□□□□□ -0.02
R3HDM1-213ENST00000463230 TMEM260Q9NX78 707 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms