RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 SPATA4Q8NEY3 305 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 GRAPLQ8TC17 118 aaPredicted RBP8.19□□□□□ -1.1
SREBF2-204ENST00000462539 SNX29Q8TEQ0 813 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 EEF2KMTQ96G04 330 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 CDK5RAP3Q96JB5 506 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 DRC1Q96MC2 740 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 GDAP1L1Q96MZ0 367 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 LRRC1Q9BTT6 524 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 LRRC27Q9C0I9 530 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 DEF6Q9H4E7 631 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 RIC8AQ9NPQ8 531 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 FAM207AQ9NSI2 230 aaPredicted RBP8.19□□□□□ -1.1
SREBF2-204ENST00000462539 EHD2Q9NZN4 543 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 CEP72Q9P209 647 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 DMGDHQ9UI17 866 aaKnown RBP8.19□□□□□ -1.1
SREBF2-204ENST00000462539 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
SREBF2-204ENST00000462539 IGKV6D-41A0A0C4DH26 115 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 GOLGA6CA6NDK9 693 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 POTEMA6NI47 508 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 USP17L5A8MUK1 530 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 CPP00450 1065 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 GOLGA6DP0CG33 693 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 EPB41P11171 864 aaKnown RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 PDHBP11177 359 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 PLCG2P16885 1265 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 MAGEA9P43362 315 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 KCNQ4P56696 695 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 ATP2B2Q01814 1243 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 PPFIA1Q13136 1202 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 SEPT2Q15019 361 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 ASPRV1Q53RT3 343 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 HYIQ5T013 277 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 KLHDC7AQ5VTJ3 777 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 EMBQ6PCB8 327 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 TPTE2Q6XPS3 522 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 GBP6Q6ZN66 633 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 DYMQ7RTS9 669 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 KCNK18Q7Z418 384 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 CCDC84Q86UT8 332 aaPredicted RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 ZC3H3Q8IXZ2 948 aaKnown RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 TSEN2Q8NCE0 465 aaKnown RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 HDAC7Q8WUI4 952 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 SYN2Q92777 582 aaPredicted RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 MTMR8Q96EF0 704 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 CEP95Q96GE4 821 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 ZFP91Q96JP5 570 aaPredicted RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 GPR101Q96P66 508 aaPredicted RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 LSM14BQ9BX40 385 aaKnown RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 TLR10Q9BXR5 811 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 PLEKHA4Q9H4M7 779 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 MMRN2Q9H8L6 949 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 GOLGA6AQ9NYA3 693 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 PODXL2Q9NZ53 605 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 SMARCAL1Q9NZC9 954 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 STIM2Q9P246 746 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 RGS17Q9UGC6 210 aaPredicted RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 RSPH14Q9UHP6 348 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 SALL4Q9UJQ4 1053 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 GAKO14976 1311 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 GRIN2DO15399 1336 aa8.18□□□□□ -1.1
SREBF2-204ENST00000462539 FRMPD2Q68DX3 1309 aaPredicted RBP8.18□□□□□ -1.1
SREBF2-204ENST00000462539 LOXHD1Q8IVV2 1947 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 GRID2IPA4D2P6 1211 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 GNPATO15228 680 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 SLC26A4O43511 780 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 OPA1O60313 960 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 TLR2O60603 784 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 ZPR1O75312 459 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 NOL4O94818 638 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 SERPING1P05155 500 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 SNHG28P0DPA3 235 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 PAFAH1B1P43034 410 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 CLK2P49760 499 aaKnown RBP8.17□□□□□ -1.1
SREBF2-204ENST00000462539 MARSP56192 900 aaKnown RBP8.17□□□□□ -1.1
SREBF2-204ENST00000462539 RHBDL3P58872 404 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 SKOR1P84550 965 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 GFPT1Q06210 699 aaPredicted RBP8.17□□□□□ -1.1
SREBF2-204ENST00000462539 PDIA5Q14554 519 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 CCDC40Q4G0X9 1142 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 GLE1Q53GS7 698 aaKnown RBP8.17□□□□□ -1.1
SREBF2-204ENST00000462539 CCDC181Q5TID7 509 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 SFMBT2Q5VUG0 894 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 KRT79Q5XKE5 535 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 ALS2CLQ60I27 953 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 C8orf74Q6P047 294 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.17□□□□□ -1.1
SREBF2-204ENST00000462539 TMC4Q7Z404 712 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 GPIHBP1Q8IV16 184 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 MYOCDQ8IZQ8 938 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 RNF10Q8N5U6 811 aaKnown RBP8.17□□□□□ -1.1
SREBF2-204ENST00000462539 GLIS3Q8NEA6 775 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 DDX12PQ92771 950 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 DNAJC19Q96DA6 116 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 CEP63Q96MT8 703 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 NOX5Q96PH1 765 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 RAB34Q9BZG1 259 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 UBA5Q9GZZ9 404 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 GANQ9H2C0 597 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms