RNA–Protein interactions for RNA: ENST00000462297.1

AUP1-203, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 3

Gene AUP1, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-203ENST00000462297 HTATIP2Q9BUP3 242 aa11.32□□□□□ -0.6
AUP1-203ENST00000462297 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
AUP1-203ENST00000462297 C11orf49Q9H6J7 331 aa11.32□□□□□ -0.6
AUP1-203ENST00000462297 SPC25Q9HBM1 224 aa11.32□□□□□ -0.6
AUP1-203ENST00000462297 JADE2Q9NQC1 790 aa11.32□□□□□ -0.6
AUP1-203ENST00000462297 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
AUP1-203ENST00000462297 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 BTBD18B2RXH4 712 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 FAM86B1E9PN63 330 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
AUP1-203ENST00000462297 NKRFO15226 690 aaKnown RBP eCLIP11.31□□□□□ -0.6
AUP1-203ENST00000462297 FIBPO43427 364 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 EDIL3O43854 480 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 GGPS1O95749 300 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 MMP1P03956 469 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 FAM86B2P0C5J1 330 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 ARP10275 920 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 COL6A1P12109 1028 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 CST5P28325 142 aaPredicted RBP11.31□□□□□ -0.6
AUP1-203ENST00000462297 GJB2P29033 226 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 ICAM3P32942 547 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 KRT2P35908 639 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 ACLYP53396 1101 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
AUP1-203ENST00000462297 MTMR1Q13613 665 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 CUL4AQ13619 759 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 NONOQ15233 471 aaKnown RBP eCLIP11.31□□□□□ -0.6
AUP1-203ENST00000462297 INF2Q27J81 1249 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 EARS2Q5JPH6 523 aaKnown RBP11.31□□□□□ -0.6
AUP1-203ENST00000462297 CELF3Q5SZQ8 465 aaKnown RBP11.31□□□□□ -0.6
AUP1-203ENST00000462297 MCTP2Q6DN12 878 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 CCSAPQ6IQ19 270 aaPredicted RBP11.31□□□□□ -0.6
AUP1-203ENST00000462297 PIK3AP1Q6ZUJ8 805 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 KRT25Q7Z3Z0 450 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 NLRX1Q86UT6 975 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 DHX37Q8IY37 1157 aaKnown RBP11.31□□□□□ -0.6
AUP1-203ENST00000462297 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
AUP1-203ENST00000462297 TBCKQ8TEA7 893 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 AFG1LQ8WV93 481 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 GPRASP2Q96D09 838 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 MXRA8Q9BRK3 442 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 PHF24Q9UPV7 400 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 SMC3Q9UQE7 1217 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 Q9Y3F1 56 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 TELO2Q9Y4R8 837 aa11.31□□□□□ -0.6
AUP1-203ENST00000462297 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
AUP1-203ENST00000462297 CCDC194A0A1B0GVG4 234 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 A0A1W2PQ45 241 aaPredicted RBP11.3□□□□□ -0.6
AUP1-203ENST00000462297 A0A1W2PQY0 241 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 ATP9AO75110 1047 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 ASGR1P07306 291 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 MYL3P08590 195 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 CYP3A4P08684 503 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 NKX3-2P78367 333 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 SP4Q02446 784 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 CEP55Q53EZ4 464 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 KCNV1Q6PIU1 500 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 CXCL17Q6UXB2 119 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 CYFIP1Q7L576 1253 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 PLA2G4DQ86XP0 818 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 HSCBQ8IWL3 235 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 TNFRSF25Q93038 417 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 SNX21Q969T3 373 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 SPATA33Q96N06 139 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 BRMS1Q9HCU9 246 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 KCNH7Q9NS40 1196 aa11.3□□□□□ -0.6
AUP1-203ENST00000462297 IGLV3-22A0A075B6J6 115 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 MEIS1O00470 390 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 TDP2O95551 362 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 MMP3P08254 477 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 TGFB3P10600 412 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 KCNA2P16389 499 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 CPT1AP50416 773 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 LAMC2Q13753 1193 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 LRRC26Q2I0M4 334 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 PRR16Q569H4 304 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 PCSK9Q8NBP7 692 aaKnown RBP11.29□□□□□ -0.6
AUP1-203ENST00000462297 FBXO18Q8NFZ0 1043 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 PPP1R13LQ8WUF5 828 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 VTI1AQ96AJ9 217 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 TSEN34Q9BSV6 310 aaKnown RBP11.29□□□□□ -0.6
AUP1-203ENST00000462297 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 AGO4Q9HCK5 861 aaKnown RBP11.29□□□□□ -0.6
AUP1-203ENST00000462297 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.29□□□□□ -0.6
AUP1-203ENST00000462297 MYH7BA7E2Y1 1941 aa11.29□□□□□ -0.6
AUP1-203ENST00000462297 MOXD2PA6NHM9 499 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 A6NJR5 290 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 KIF28PB7ZC32 967 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 DDX39AO00148 427 aaKnown RBP11.28□□□□□ -0.6
AUP1-203ENST00000462297 ZEB2O60315 1214 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 ZNF286BP0CG31 522 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 CIITAP33076 1130 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 USP11P51784 963 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 CHMP4BP1P59074 171 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 PSMC6P62333 389 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 ITGB3BPQ13352 177 aaPredicted RBP11.28□□□□□ -0.6
AUP1-203ENST00000462297 NEDD9Q14511 834 aa11.28□□□□□ -0.6
AUP1-203ENST00000462297 SAFBQ15424 915 aaKnown RBP eCLIP11.28□□□□□ -0.6
AUP1-203ENST00000462297 LETM2Q2VYF4 491 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms