RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 PSEN2P49810 448 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
LDB1-203ENST00000461873 ARHGAP1Q07960 439 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 MFSD10Q14728 455 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 KIAA0753Q2KHM9 967 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 CELF3Q5SZQ8 465 aaKnown RBP10.2□□□□□ -0.78
LDB1-203ENST00000461873 XRRA1Q6P2D8 792 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 CCDC62Q6P9F0 684 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 HEATR3Q7Z4Q2 680 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 FANCBQ8NB91 859 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 MAFAQ8NHW3 353 aaPredicted RBP10.2□□□□□ -0.78
LDB1-203ENST00000461873 AFAP1L1Q8TED9 768 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 MYLIPQ8WY64 445 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 EMID1Q96A84 441 aaPredicted RBP10.2□□□□□ -0.78
LDB1-203ENST00000461873 ZBED2Q9BTP6 218 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 TSPYL2Q9H2G4 693 aaPredicted RBP10.2□□□□□ -0.78
LDB1-203ENST00000461873 RTEL1Q9NZ71 1219 aa10.2□□□□□ -0.78
LDB1-203ENST00000461873 CCDC196A0A1B0GTZ2 297 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 ZBTB43O43298 467 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 FIBPO43427 364 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 PPP1R11O60927 126 aaPredicted RBP10.19□□□□□ -0.78
LDB1-203ENST00000461873 REC8O95072 547 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 ZNF286BP0CG31 522 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 ATP2A2P16615 1042 aaKnown RBP10.19□□□□□ -0.78
LDB1-203ENST00000461873 RXRAP19793 462 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 IGFBP4P22692 258 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 ANTXR2P58335 489 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 GHRHRQ02643 423 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 NECTIN1Q15223 517 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 DHX32Q7L7V1 743 aaKnown RBP10.19□□□□□ -0.78
LDB1-203ENST00000461873 IL27Q8NEV9 243 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 TNPO1Q92973 898 aaKnown RBP10.19□□□□□ -0.78
LDB1-203ENST00000461873 GUCD1Q96NT3 240 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 USP26Q9BXU7 913 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 LRRC2Q9BYS8 371 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 PBX4Q9BYU1 374 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 GLT8D2Q9H1C3 349 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 SENP2Q9HC62 589 aa10.19□□□□□ -0.78
LDB1-203ENST00000461873 UMODL1Q5DID0 1318 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 C17orf102A2RUQ5 167 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 CYTH3O43739 400 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 IQCF3P0C7M6 154 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 SELPP16109 830 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 PSMA5P28066 241 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 ZNF76P36508 570 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 NAPAP54920 295 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 SP4Q02446 784 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 RTN1Q16799 776 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 MYSM1Q5VVJ2 828 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 PPP2R2DQ66LE6 453 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 LRRC8DQ7L1W4 858 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 SESTD1Q86VW0 696 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 RAB11FIP4Q86YS3 637 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.18□□□□□ -0.78
LDB1-203ENST00000461873 PPP1R13LQ8WUF5 828 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 SLC9A7Q96T83 725 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 WNT8AQ9H1J5 351 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 PPP4R2Q9NY27 417 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 HDAC6Q9UBN7 1215 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 GTF2IRD1Q9UHL9 959 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 TCEAL9Q9UHQ7 104 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 TAF6LQ9Y6J9 622 aa10.18□□□□□ -0.78
LDB1-203ENST00000461873 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 LAMA2P24043 3122 aaKnown RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 GOLGA8AA7E2F4 631 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 GOLGA8BA8MQT2 603 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 GRXCR1A8MXD5 290 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 H3BRB1 525 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 PIK3CDO00329 1044 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 EFCAB14O75071 495 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 BAIAP3O94812 1187 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 PLEKHA8P1O95397 391 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 UBA1P22314 1058 aaKnown RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 PTK7Q13308 1070 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 IKBKEQ14164 716 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 UTP14CQ5TAP6 766 aaKnown RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 PCNX4Q63HM2 1172 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 GDF6Q6KF10 455 aaPredicted RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 USP17L6PQ6QN14 398 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 BLOC1S2Q6QNY1 142 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 METTL7BQ6UX53 244 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 C16orf59Q7L2K0 433 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 CYFIP1Q7L576 1253 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 CMTR1Q8N1G2 835 aaKnown RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 SRBD1Q8N5C6 995 aaKnown RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 CCDC12Q8WUD4 166 aaPredicted RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 PPM1EQ8WY54 764 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 ATP6V0A1Q93050 837 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 ZFP91Q96JP5 570 aaPredicted RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 NKX2-4Q9H2Z4 354 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 TTYH1Q9H313 450 aaPredicted RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 TUT1Q9H6E5 874 aaKnown RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 PCDHA11Q9Y5I1 949 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 KAT6AQ92794 2004 aa10.17□□□□□ -0.78
LDB1-203ENST00000461873 TRIP12Q14669 1992 aaPredicted RBP10.17□□□□□ -0.78
LDB1-203ENST00000461873 EMSYQ7Z589 1322 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 KLF18A0A0U1RQI7 1052 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 hCG_1984214I3L0E3 225 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 OPLAHO14841 1288 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms