RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 COG5Q9UP83 839 aa17.9■□□□□ 0.46
SF3A3-203ENST00000461869 ARHGEF15O94989 841 aa17.89■□□□□ 0.45
SF3A3-203ENST00000461869 ZNF543Q08ER8 600 aa17.89■□□□□ 0.45
SF3A3-203ENST00000461869 WTAPQ15007 396 aa17.89■□□□□ 0.45
SF3A3-203ENST00000461869 SPRYD3Q8NCJ5 442 aa17.89■□□□□ 0.45
SF3A3-203ENST00000461869 GTF3C6Q969F1 213 aa17.89■□□□□ 0.45
SF3A3-203ENST00000461869 SLKQ9H2G2 1235 aaPredicted RBP17.89■□□□□ 0.45
SF3A3-203ENST00000461869 CHD9Q3L8U1 2897 aa17.89■□□□□ 0.45
SF3A3-203ENST00000461869 SCN5AQ14524 2016 aa17.89■□□□□ 0.45
SF3A3-203ENST00000461869 TCF20Q9UGU0 1960 aaKnown RBP17.88■□□□□ 0.45
SF3A3-203ENST00000461869 KLF18A0A0U1RQI7 1052 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 CCDC69A6NI79 296 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 GOLGA8BA8MQT2 603 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 DHX16O60231 1041 aaKnown RBP17.88■□□□□ 0.45
SF3A3-203ENST00000461869 PFKFB2O60825 505 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 BAIAP3O94812 1187 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 ARIH2O95376 493 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 RCAN1P53805 252 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 APOBRQ0VD83 1088 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 PTGISQ16647 500 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 USH1GQ495M9 461 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 SYNE3Q6ZMZ3 975 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 IGDCC4Q8TDY8 1250 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 ZSCAN10Q96SZ4 725 aaPredicted RBP17.88■□□□□ 0.45
SF3A3-203ENST00000461869 LY9Q9HBG7 655 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 CHMP5Q9NZZ3 219 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 SCN10AQ9Y5Y9 1956 aa17.88■□□□□ 0.45
SF3A3-203ENST00000461869 TLL1O43897 1013 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 LARGE1O95461 756 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 SNHG28P0DPA3 235 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 PLA2G5P39877 138 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 KCNJ6P48051 423 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 CCDC83Q8IWF9 413 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 CCDC155Q8N6L0 562 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 RGS22Q8NE09 1264 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 AFG1LQ8WV93 481 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 FAM122AQ96E09 287 aa17.87■□□□□ 0.45
SF3A3-203ENST00000461869 LARP6Q9BRS8 491 aaKnown RBP17.87■□□□□ 0.45
SF3A3-203ENST00000461869 NAP1L2Q9ULW6 460 aaPredicted RBP17.87■□□□□ 0.45
SF3A3-203ENST00000461869 GOLGA8HP0CJ92 632 aa17.86■□□□□ 0.45
SF3A3-203ENST00000461869 GRB10Q13322 594 aa17.86■□□□□ 0.45
SF3A3-203ENST00000461869 GPATCH4Q5T3I0 446 aaKnown RBP17.86■□□□□ 0.45
SF3A3-203ENST00000461869 CCDC62Q6P9F0 684 aa17.86■□□□□ 0.45
SF3A3-203ENST00000461869 CAGE1Q8TC20 777 aa17.86■□□□□ 0.45
SF3A3-203ENST00000461869 AFAP1L1Q8TED9 768 aa17.86■□□□□ 0.45
SF3A3-203ENST00000461869 HLA-CQ95604 372 aa17.86■□□□□ 0.45
SF3A3-203ENST00000461869 LLPHQ9BRT6 129 aaKnown RBP17.86■□□□□ 0.45
SF3A3-203ENST00000461869 FOXD4L1Q9NU39 408 aa17.86■□□□□ 0.45
SF3A3-203ENST00000461869 SMC3Q9UQE7 1217 aa17.86■□□□□ 0.45
SF3A3-203ENST00000461869 SLC12A7Q9Y666 1083 aa17.86■□□□□ 0.45
SF3A3-203ENST00000461869 MMP3P08254 477 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 PDIA4P13667 645 aaKnown RBP17.85■□□□□ 0.45
SF3A3-203ENST00000461869 PDIA3P30101 505 aaKnown RBP17.85■□□□□ 0.45
SF3A3-203ENST00000461869 DDIT3P35638 169 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 STK3Q13188 491 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 NID2Q14112 1375 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 LY6KQ17RY6 165 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 IFIT1BQ5T764 474 aaKnown RBP17.85■□□□□ 0.45
SF3A3-203ENST00000461869 GDF6Q6KF10 455 aaPredicted RBP17.85■□□□□ 0.45
SF3A3-203ENST00000461869 APOA5Q6Q788 366 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 SEPT14Q6ZU15 432 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 SESTD1Q86VW0 696 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 CTAGE1Q96RT6 745 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 ZBED2Q9BTP6 218 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 UBA5Q9GZZ9 404 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 KIF3AQ9Y496 699 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 CHD7Q9P2D1 2997 aa17.85■□□□□ 0.45
SF3A3-203ENST00000461869 ZBTB43O43298 467 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 GH1P01241 217 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 SELPP16109 830 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 WDR5P61964 334 aaKnown RBP17.84■□□□□ 0.45
SF3A3-203ENST00000461869 NUCB2P80303 420 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 ARHGAP1Q07960 439 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 GPNMBQ14956 572 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 SEC23AQ15436 765 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 CPLX2Q6PUV4 134 aaKnown RBP17.84■□□□□ 0.45
SF3A3-203ENST00000461869 LRRC8DQ7L1W4 858 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 SPRED2Q7Z698 418 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 TMCO2Q7Z6W1 182 aaPredicted RBP17.84■□□□□ 0.45
SF3A3-203ENST00000461869 DGKHQ86XP1 1220 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 ENAHQ8N8S7 591 aaPredicted RBP17.84■□□□□ 0.45
SF3A3-203ENST00000461869 NSUN6Q8TEA1 469 aaKnown RBP17.84■□□□□ 0.45
SF3A3-203ENST00000461869 TBC1D5Q92609 795 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 TAAR1Q96RJ0 339 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 ZKSCAN3Q9BRR0 538 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 CPVLQ9H3G5 476 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 TANC1Q9C0D5 1861 aa17.84■□□□□ 0.45
SF3A3-203ENST00000461869 LCHNA4D1U4 455 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 LPXNO60711 386 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 CALM1P0DP23 149 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 CALM2P0DP24 149 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 CALM3P0DP25 149 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 METAP2P50579 478 aaKnown RBP eCLIP17.83■□□□□ 0.44
SF3A3-203ENST00000461869 HMGN5P82970 282 aaKnown RBP17.83■□□□□ 0.44
SF3A3-203ENST00000461869 SCRN1Q12765 414 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 CDC37Q16543 378 aaPredicted RBP17.83■□□□□ 0.44
SF3A3-203ENST00000461869 CATIPQ7Z7H3 387 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 NECAB1Q8N987 351 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 SYTL5Q8TDW5 730 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms