RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 TEX11Q8IYF3 940 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 LPAR1Q92633 364 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 P2RX7Q99572 595 aaKnown RBP6.19□□□□□ -1.42
BRCA1-206ENST00000461574 PORCNQ9H237 461 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 MRS2Q9HD23 443 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 RAI14Q9P0K7 980 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 DDX20Q9UHI6 824 aaKnown RBP6.19□□□□□ -1.42
BRCA1-206ENST00000461574 KCNMB2Q9Y691 235 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 SIPA1L1O43166 1804 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 CHD9Q3L8U1 2897 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 REV3LO60673 3130 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 GPR75-ASB3A0A0A6YYF3 556 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 C19orf81C9J6K1 198 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 MAP4K4O95819 1239 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 GHRHP01286 108 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 PSAPP07602 524 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 ADORA1P30542 326 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 HOXA7P31268 230 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 IL15P40933 162 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 RFX5P48382 616 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 SMAD3P84022 425 aaKnown RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 MVPQ14764 893 aaKnown RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 ZYXQ15942 572 aaKnown RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 C9orf50Q5SZB4 431 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 GJC2Q5T442 439 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 MCTP1Q6DN14 999 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 ATG9AQ7Z3C6 839 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 AGGF1Q8N302 714 aaeCLIP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 ARRDC4Q8NCT1 418 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 BADQ92934 168 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 EDC3Q96F86 508 aaKnown RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 RNPC3Q96LT9 517 aaKnown RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 WDR18Q9BV38 432 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 USP44Q9H0E7 712 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 TXNRD2Q9NNW7 524 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 PI4KBQ9UBF8 816 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 TRIM33Q9UPN9 1127 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 MYH1P12882 1939 aa6.18□□□□□ -1.42
BRCA1-206ENST00000461574 PDS5AQ29RF7 1337 aaKnown RBP6.18□□□□□ -1.42
BRCA1-206ENST00000461574 A0A1B0GUL7 405 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 BAG3O95817 575 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 HLA-DOAP06340 250 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 CYP2C19P33261 490 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 RHBDL3P58872 404 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 CCDC184Q52MB2 194 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 COX20Q5RI15 118 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 ANO1Q5XXA6 986 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 ATF7IPQ6VMQ6 1270 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 Q6ZS46 218 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 PPM1EQ8WY54 764 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 NEUROD6Q96NK8 337 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 DHX36Q9H2U1 1008 aaKnown RBP6.17□□□□□ -1.42
BRCA1-206ENST00000461574 TTYH1Q9H313 450 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-206ENST00000461574 LRP2BPQ9P2M1 347 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 RBPJLQ9UBG7 517 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 ZBTB21Q9ULJ3 1066 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 HDAC5Q9UQL6 1122 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 AKAP2Q9Y2D5 859 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 RABGAP1Q9Y3P9 1069 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 ZNF236Q9UL36 1845 aa6.17□□□□□ -1.42
BRCA1-206ENST00000461574 SLC15A5A6NIM6 579 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 HOXD8P13378 290 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-206ENST00000461574 GLB1P16278 677 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 TIMM10P62072 90 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 RRP1BQ14684 758 aaKnown RBP6.16□□□□□ -1.42
BRCA1-206ENST00000461574 TRIM60Q495X7 471 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 NAA16Q6N069 864 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-206ENST00000461574 SLC39A5Q6ZMH5 540 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 DPP9Q86TI2 863 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 MAPKAPK5Q8IW41 473 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 SPATA5Q8NB90 893 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 SH3RF3Q8TEJ3 882 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-206ENST00000461574 USP6NLQ92738 828 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 FERMT2Q96AC1 680 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 NSUN4Q96CB9 384 aaKnown RBP6.16□□□□□ -1.42
BRCA1-206ENST00000461574 FAM122AQ96E09 287 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 GOLGA2P5Q9HBQ8 144 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 PDLIM7Q9NR12 457 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 AATFQ9NY61 560 aaKnown RBP eCLIP6.16□□□□□ -1.42
BRCA1-206ENST00000461574 FLRT1Q9NZU1 646 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 PA2G4Q9UQ80 394 aaKnown RBP6.16□□□□□ -1.42
BRCA1-206ENST00000461574 MYH8P13535 1937 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 TRANK1O15050 2925 aa6.16□□□□□ -1.42
BRCA1-206ENST00000461574 PLXNA1Q9UIW2 1896 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 MYO5AQ9Y4I1 1855 aaKnown RBP6.15□□□□□ -1.42
BRCA1-206ENST00000461574 MED26O95402 600 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 CYBAP13498 195 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 RAG1P15918 1043 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 SOX18P35713 384 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 PLA2G5P39877 138 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 ADCYAP1R1P41586 468 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 CD97P48960 835 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 USP14P54578 494 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 FPGSQ05932 587 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 GRB14Q14449 540 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 RAB3GAP1Q15042 981 aa6.15□□□□□ -1.42
BRCA1-206ENST00000461574 TRIP4Q15650 581 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-206ENST00000461574 PI16Q6UXB8 463 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms