RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 GDF6Q6KF10 455 aaPredicted RBP27.16■■□□□ 1.94
LMBR1-214ENST00000461469 TTYH1Q9H313 450 aaPredicted RBP27.16■■□□□ 1.94
LMBR1-214ENST00000461469 CXXC1Q9P0U4 656 aaPredicted RBP27.16■■□□□ 1.94
LMBR1-214ENST00000461469 GRXCR1A8MXD5 290 aa27.15■■□□□ 1.94
LMBR1-214ENST00000461469 CASTP20810 708 aaKnown RBP27.15■■□□□ 1.94
LMBR1-214ENST00000461469 DGKDQ16760 1214 aa27.15■■□□□ 1.94
LMBR1-214ENST00000461469 RTN1Q16799 776 aa27.15■■□□□ 1.94
LMBR1-214ENST00000461469 TET1Q8NFU7 2136 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 HAS3O00219 553 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 F2P00734 622 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 ICAM3P32942 547 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 PTPN11Q06124 597 aaPredicted RBP27.14■■□□□ 1.94
LMBR1-214ENST00000461469 APOBRQ0VD83 1088 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 HIC1Q14526 733 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 SYNE3Q6ZMZ3 975 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 Q6ZUG5 572 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 HEATR3Q7Z4Q2 680 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 SPATA33Q96N06 139 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 PSTPIP2Q9H939 334 aa27.14■■□□□ 1.94
LMBR1-214ENST00000461469 GOLGA8AA7E2F4 631 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 GOLGA8BA8MQT2 603 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 SPATA31C2B4DYI2 1134 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 SUPT20HL2P0C7V6 817 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 TGFB3P10600 412 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 PSEN2P49810 448 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 PCNX4Q63HM2 1172 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 KCNV1Q6PIU1 500 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 SESTD1Q86VW0 696 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 DHX38Q92620 1227 aaKnown RBP27.13■■□□□ 1.93
LMBR1-214ENST00000461469 CUL5Q93034 780 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 ALG1Q9BT22 464 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 RBM28Q9NW13 759 aaKnown RBP27.13■■□□□ 1.93
LMBR1-214ENST00000461469 HDAC6Q9UBN7 1215 aa27.13■■□□□ 1.93
LMBR1-214ENST00000461469 HMGB1P09429 215 aaKnown RBP27.12■■□□□ 1.93
LMBR1-214ENST00000461469 MFSD10Q14728 455 aa27.12■■□□□ 1.93
LMBR1-214ENST00000461469 PSRC1Q6PGN9 363 aaPredicted RBP27.12■■□□□ 1.93
LMBR1-214ENST00000461469 HERVK_113Q902F9 699 aa27.12■■□□□ 1.93
LMBR1-214ENST00000461469 BRF1Q92994 677 aa27.12■■□□□ 1.93
LMBR1-214ENST00000461469 C16orf70Q9BSU1 422 aa27.12■■□□□ 1.93
LMBR1-214ENST00000461469 V9GY48 417 aaPredicted RBP27.12■■□□□ 1.93
LMBR1-214ENST00000461469 CDH23Q9H251 3354 aa27.11■■□□□ 1.93
LMBR1-214ENST00000461469 ADD1P35611 737 aaKnown RBP27.11■■□□□ 1.93
LMBR1-214ENST00000461469 PBX2P40425 430 aa27.11■■□□□ 1.93
LMBR1-214ENST00000461469 PTGISQ16647 500 aa27.11■■□□□ 1.93
LMBR1-214ENST00000461469 ZNF697Q5TEC3 545 aa27.11■■□□□ 1.93
LMBR1-214ENST00000461469 OTOP2Q7RTS6 562 aa27.11■■□□□ 1.93
LMBR1-214ENST00000461469 SEMA6BQ9H3T3 888 aa27.11■■□□□ 1.93
LMBR1-214ENST00000461469 GTF2IRD1Q9UHL9 959 aa27.11■■□□□ 1.93
LMBR1-214ENST00000461469 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.1■■□□□ 1.93
LMBR1-214ENST00000461469 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.1■■□□□ 1.93
LMBR1-214ENST00000461469 RPS6KB1P23443 525 aa27.1■■□□□ 1.93
LMBR1-214ENST00000461469 ZNF200P98182 395 aaPredicted RBP27.1■■□□□ 1.93
LMBR1-214ENST00000461469 KIAA0753Q2KHM9 967 aa27.1■■□□□ 1.93
LMBR1-214ENST00000461469 BLOC1S2Q6QNY1 142 aa27.1■■□□□ 1.93
LMBR1-214ENST00000461469 WNT8BQ93098 351 aa27.1■■□□□ 1.93
LMBR1-214ENST00000461469 MLXIPQ9HAP2 919 aa27.1■■□□□ 1.93
LMBR1-214ENST00000461469 PPP4R2Q9NY27 417 aa27.1■■□□□ 1.93
LMBR1-214ENST00000461469 STXBP3O00186 592 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 ADAMTS3O15072 1205 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 FIBPO43427 364 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 PPFIA4O75335 1185 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 STAM2O75886 525 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 REC8O95072 547 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 FGBP02675 491 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 ITGB5P18084 799 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 GNPTABQ3T906 1256 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 CYFIP1Q7L576 1253 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 PGBD1Q96JS3 809 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 AGXT2Q9BYV1 514 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 NAP1L2Q9ULW6 460 aaPredicted RBP27.09■■□□□ 1.93
LMBR1-214ENST00000461469 PCDHA6Q9UN73 950 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 STXBP5LQ9Y2K9 1186 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 PCDHA8Q9Y5H6 950 aa27.09■■□□□ 1.93
LMBR1-214ENST00000461469 ATP9AO75110 1047 aa27.08■■□□□ 1.93
LMBR1-214ENST00000461469 IQCF3P0C7M6 154 aa27.08■■□□□ 1.93
LMBR1-214ENST00000461469 DNAJB2P25686 324 aa27.08■■□□□ 1.93
LMBR1-214ENST00000461469 GPNMBQ14956 572 aa27.08■■□□□ 1.93
LMBR1-214ENST00000461469 DEFB128Q7Z7B8 93 aa27.08■■□□□ 1.93
LMBR1-214ENST00000461469 NID2Q14112 1375 aa27.08■■□□□ 1.93
LMBR1-214ENST00000461469 PITPNM1O00562 1244 aa27.07■■□□□ 1.92
LMBR1-214ENST00000461469 LGALS2P05162 132 aa27.07■■□□□ 1.92
LMBR1-214ENST00000461469 RCAN1P53805 252 aa27.07■■□□□ 1.92
LMBR1-214ENST00000461469 NAPAP54920 295 aa27.07■■□□□ 1.92
LMBR1-214ENST00000461469 GPR20Q99678 358 aa27.07■■□□□ 1.92
LMBR1-214ENST00000461469 USP26Q9BXU7 913 aa27.07■■□□□ 1.92
LMBR1-214ENST00000461469 PBX4Q9BYU1 374 aa27.07■■□□□ 1.92
LMBR1-214ENST00000461469 UBIAD1Q9Y5Z9 338 aa27.07■■□□□ 1.92
LMBR1-214ENST00000461469 PTPRSQ13332 1948 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 METAP2P50579 478 aaKnown RBP eCLIP27.06■■□□□ 1.92
LMBR1-214ENST00000461469 FGD1P98174 961 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 XRRA1Q6P2D8 792 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 METTL7BQ6UX53 244 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 TRIM50Q86XT4 487 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 FBXL16Q8N461 479 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 C7orf31Q8N865 590 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 CDX2Q99626 313 aaPredicted RBP27.06■■□□□ 1.92
LMBR1-214ENST00000461469 KATNAL1Q9BW62 490 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 RIC8AQ9NPQ8 531 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 TMEM260Q9NX78 707 aa27.06■■□□□ 1.92
LMBR1-214ENST00000461469 NOD1Q9Y239 953 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms