RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 RFXAPO00287 272 aa21.25■□□□□ 0.99
COL9A2-205ENST00000461118 ARHGEF15O94989 841 aa21.25■□□□□ 0.99
COL9A2-205ENST00000461118 PFKMP08237 780 aa21.25■□□□□ 0.99
COL9A2-205ENST00000461118 RCAN1P53805 252 aa21.25■□□□□ 0.99
COL9A2-205ENST00000461118 TFF2Q03403 129 aa21.25■□□□□ 0.99
COL9A2-205ENST00000461118 POLR3EQ9NVU0 708 aa21.25■□□□□ 0.99
COL9A2-205ENST00000461118 ZBBXA8MT70 800 aa21.24■□□□□ 0.99
COL9A2-205ENST00000461118 TMTC3Q6ZXV5 915 aa21.24■□□□□ 0.99
COL9A2-205ENST00000461118 DEFB128Q7Z7B8 93 aa21.24■□□□□ 0.99
COL9A2-205ENST00000461118 MICU3Q86XE3 530 aa21.24■□□□□ 0.99
COL9A2-205ENST00000461118 PPP1R13LQ8WUF5 828 aa21.24■□□□□ 0.99
COL9A2-205ENST00000461118 JAKMIP1Q96N16 626 aaKnown RBP21.24■□□□□ 0.99
COL9A2-205ENST00000461118 PXMP2Q9NR77 195 aa21.24■□□□□ 0.99
COL9A2-205ENST00000461118 MTCH2Q9Y6C9 303 aa21.24■□□□□ 0.99
COL9A2-205ENST00000461118 GCOM1H8Y6P7 765 aaPredicted RBP21.23■□□□□ 0.99
COL9A2-205ENST00000461118 CA3P07451 260 aa21.23■□□□□ 0.99
COL9A2-205ENST00000461118 SUPT20HL2P0C7V6 817 aa21.23■□□□□ 0.99
COL9A2-205ENST00000461118 POLR2MP0CAP2 368 aa21.23■□□□□ 0.99
COL9A2-205ENST00000461118 PSMA5P28066 241 aa21.23■□□□□ 0.99
COL9A2-205ENST00000461118 STXBP2Q15833 593 aa21.23■□□□□ 0.99
COL9A2-205ENST00000461118 ARHGEF16Q5VV41 709 aa21.23■□□□□ 0.99
COL9A2-205ENST00000461118 BLOC1S2Q6QNY1 142 aa21.23■□□□□ 0.99
COL9A2-205ENST00000461118 RAB11FIP4Q86YS3 637 aa21.23■□□□□ 0.99
COL9A2-205ENST00000461118 CMTR1Q8N1G2 835 aaKnown RBP21.23■□□□□ 0.99
COL9A2-205ENST00000461118 SCFD2Q8WU76 684 aa21.23■□□□□ 0.99
COL9A2-205ENST00000461118 RBM28Q9NW13 759 aaKnown RBP21.23■□□□□ 0.99
COL9A2-205ENST00000461118 SEC63Q9UGP8 760 aaKnown RBP21.23■□□□□ 0.99
COL9A2-205ENST00000461118 NKRFO15226 690 aaKnown RBP eCLIP21.22■□□□□ 0.99
COL9A2-205ENST00000461118 ZBTB43O43298 467 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 MYL3P08590 195 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 CPA1P15085 419 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 RPS6KB1P23443 525 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 CPT1AP50416 773 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 KCNQ1P51787 676 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 PPP2R5BQ15173 497 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 NBPF20Q3BBV1 942 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 PIBF1Q8WXW3 757 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 MTG1Q9BT17 334 aaPredicted RBP21.22■□□□□ 0.99
COL9A2-205ENST00000461118 AGXT2Q9BYV1 514 aa21.22■□□□□ 0.99
COL9A2-205ENST00000461118 KLF18A0A0U1RQI7 1052 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 A6NJR5 290 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 EIF3JO75822 258 aaKnown RBP21.21■□□□□ 0.99
COL9A2-205ENST00000461118 NR3C2P08235 984 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 IQCF3P0C7M6 154 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 HOXA13P31271 388 aaPredicted RBP21.21■□□□□ 0.99
COL9A2-205ENST00000461118 KRT40Q6A162 431 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 MICALL1Q8N3F8 863 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 OR6J1Q8NGC5 347 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 COPS5Q92905 334 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 CTAGE1Q96RT6 745 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 PDCD2LQ9BRP1 358 aa21.21■□□□□ 0.99
COL9A2-205ENST00000461118 MYH7BA7E2Y1 1941 aa21.2■□□□□ 0.98
COL9A2-205ENST00000461118 PITPNM1O00562 1244 aa21.2■□□□□ 0.98
COL9A2-205ENST00000461118 EIF2AK2P19525 551 aaKnown RBP21.2■□□□□ 0.98
COL9A2-205ENST00000461118 FGD1P98174 961 aa21.2■□□□□ 0.98
COL9A2-205ENST00000461118 FUT2Q10981 343 aa21.2■□□□□ 0.98
COL9A2-205ENST00000461118 RTN1Q16799 776 aa21.2■□□□□ 0.98
COL9A2-205ENST00000461118 NFRKBQ6P4R8 1299 aa21.2■□□□□ 0.98
COL9A2-205ENST00000461118 CCDC62Q6P9F0 684 aa21.2■□□□□ 0.98
COL9A2-205ENST00000461118 Q6ZUG5 572 aa21.2■□□□□ 0.98
COL9A2-205ENST00000461118 CERS4Q9HA82 394 aa21.2■□□□□ 0.98
COL9A2-205ENST00000461118 PIK3CDO00329 1044 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 TXNP10599 105 aaKnown RBP21.19■□□□□ 0.98
COL9A2-205ENST00000461118 CASTP20810 708 aaKnown RBP21.19■□□□□ 0.98
COL9A2-205ENST00000461118 RFC2P35250 354 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 TAP1Q03518 808 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 GPNMBQ14956 572 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 SPRED2Q7Z698 418 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 VSIG10LQ86VR7 867 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 CCDC82Q8N4S0 544 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 PHOSPHO2Q8TCD6 241 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 SLC9A7Q96T83 725 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 TM6SF1Q9BZW5 370 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 TSPYL2Q9H2G4 693 aaPredicted RBP21.19■□□□□ 0.98
COL9A2-205ENST00000461118 ZSWIM6Q9HCJ5 1215 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 FAM217BQ9NTX9 383 aaPredicted RBP21.19■□□□□ 0.98
COL9A2-205ENST00000461118 BRWD1Q9NSI6 2320 aa21.19■□□□□ 0.98
COL9A2-205ENST00000461118 ARIH2O95376 493 aa21.18■□□□□ 0.98
COL9A2-205ENST00000461118 PGM5Q15124 567 aa21.18■□□□□ 0.98
COL9A2-205ENST00000461118 RUFY3Q7L099 469 aa21.18■□□□□ 0.98
COL9A2-205ENST00000461118 BRF1Q92994 677 aa21.18■□□□□ 0.98
COL9A2-205ENST00000461118 SIP14410 1827 aa21.18■□□□□ 0.98
COL9A2-205ENST00000461118 GOLGA8AA7E2F4 631 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 GOLGA8BA8MQT2 603 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 MEIS2O14770 477 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 LPXNO60711 386 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 CDC27P30260 824 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 EVCP57679 992 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 PTPN11Q06124 597 aaPredicted RBP21.17■□□□□ 0.98
COL9A2-205ENST00000461118 APOBRQ0VD83 1088 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 FAM47CQ5HY64 1035 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 SEPT14Q6ZU15 432 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 FCHSD1Q86WN1 690 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 HERC6Q8IVU3 1022 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 FRMPD4Q14CM0 1322 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 CNTNAP5Q8WYK1 1306 aa21.17■□□□□ 0.98
COL9A2-205ENST00000461118 NID2Q14112 1375 aa21.16■□□□□ 0.98
COL9A2-205ENST00000461118 CCDC196A0A1B0GTZ2 297 aa21.16■□□□□ 0.98
COL9A2-205ENST00000461118 hCG_1642624A0A1W2PR95 340 aa21.16■□□□□ 0.98
COL9A2-205ENST00000461118 RBAK-RBAKDNI3L0D1 243 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms