RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 PIGSQ96S52 555 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 PDCD2LQ9BRP1 358 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 RIOX1Q9H6W3 641 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 PRDM6Q9NQX0 595 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 MAP3K20Q9NYL2 800 aaKnown RBP10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 MRVI1Q9Y6F6 885 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 ERICH2A1L162 156 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 SGSM2O43147 1006 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 CYTH3O43739 400 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 REV3LO60673 3130 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 MYCLP12524 364 aaPredicted RBP10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 IGFBP4P22692 258 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 PSEN2P49810 448 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 IRX6P78412 446 aaPredicted RBP10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 TROAPQ12815 778 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 GPNMBQ14956 572 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 TMEM67Q5HYA8 995 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 RALYLQ86SE5 291 aaKnown RBP10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 VSIG10LQ86VR7 867 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 HOMER1Q86YM7 354 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 DHX37Q8IY37 1157 aaKnown RBP10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 SAMD3Q8N6K7 520 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 IL31RAQ8NI17 732 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 PPTC7Q8NI37 304 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 CAGE1Q8TC20 777 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 AFAP1L1Q8TED9 768 aa10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 DHX38Q92620 1227 aaKnown RBP10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 FTOQ9C0B1 505 aaKnown RBP eCLIP10.2□□□□□ -0.78
SOX2-OT-202ENST00000461063 PNMA6FA0A0J9YX94 578 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 GCOM1H8Y6P7 765 aaPredicted RBP10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 HAS3O00219 553 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 F2P00734 622 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 CA3P07451 260 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 POLR2MP0CAP2 368 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 ZNF286BP0CG31 522 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 HOXD8P13378 290 aaPredicted RBP10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 SELPP16109 830 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 ANTXR2P58335 489 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 SP2Q02086 613 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 RBL2Q08999 1139 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 TRAF1Q13077 416 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 WTAPQ15007 396 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 PGM5Q15124 567 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 CCDC85BQ15834 202 aaPredicted RBP10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 TJAP1Q5JTD0 557 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 CELF3Q5SZQ8 465 aaKnown RBP10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 KCNV1Q6PIU1 500 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 C7orf31Q8N865 590 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 NCOA7Q8NI08 942 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 PHOSPHO2Q8TCD6 241 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 IGDCC4Q8TDY8 1250 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 SYMPKQ92797 1274 aaKnown RBP10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 MAP4K1Q92918 833 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 SLC9A7Q96T83 725 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 HDAC6Q9UBN7 1215 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 GTF2IRD1Q9UHL9 959 aa10.19□□□□□ -0.78
SOX2-OT-202ENST00000461063 SORBS3O60504 671 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 PPFIA4O75335 1185 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 BAIAP3O94812 1187 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 GGPS1O95749 300 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 TGFB3P10600 412 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 CKBP12277 381 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 UBA1P22314 1058 aaKnown RBP10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 CCND2P30279 289 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 MFSD10Q14728 455 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 SART3Q15020 963 aaKnown RBP10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 KIAA0753Q2KHM9 967 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 HSDL1Q3SXM5 330 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 LRRC8DQ7L1W4 858 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 CATIPQ7Z7H3 387 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 FCHSD1Q86WN1 690 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 HERC6Q8IVU3 1022 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 MB21D2Q8IYB1 491 aaPredicted RBP10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 ATXN2LQ8WWM7 1075 aaKnown RBP10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 GPKOWQ92917 476 aaPredicted RBP eCLIP10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 ZFP91Q96JP5 570 aaPredicted RBP10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 SPATA33Q96N06 139 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 ALG1Q9BT22 464 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 KATNAL1Q9BW62 490 aa10.18□□□□□ -0.78
SOX2-OT-202ENST00000461063 BDP1A6H8Y1 2624 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 RFXAPO00287 272 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 ST18O60284 1047 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 NBNO60934 754 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 ARHGEF15O94989 841 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 CXCL10P02778 98 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 ZNF200P98182 395 aaPredicted RBP10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 PTK7Q13308 1070 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 PDAP1Q13442 181 aaKnown RBP10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 HIC1Q14526 733 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 TCTN1Q2MV58 587 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 TRIM71Q2Q1W2 868 aaKnown RBP10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 TRAF7Q6Q0C0 670 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 PIBF1Q8WXW3 757 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 WNT8BQ93098 351 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 ASB2Q96Q27 587 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 MAP3K14Q99558 947 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 BCAS3Q9H6U6 928 aa10.17□□□□□ -0.78
SOX2-OT-202ENST00000461063 CERS4Q9HA82 394 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms