RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ZNF827Q17R98 1081 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 TRIM61Q5EBN2 209 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 ACBD5Q5T8D3 534 aaPredicted RBP4.99□□□□□ -1.61
RFC4-211ENST00000460408 NT5DC1Q5TFE4 455 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 EEF1DP3Q658K8 133 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 PAQR3Q6TCH7 311 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 SAPCD2Q86UD0 394 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 KCTD13Q8WZ19 329 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 A0A1B0GTL3 188 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 PLD2O14939 933 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 RFPL3O75679 317 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 CYBBP04839 570 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 DBHP09172 617 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 GSTM1P09488 218 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 ECI1P42126 302 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 DALRD3Q5D0E6 543 aaKnown RBP4.98□□□□□ -1.61
RFC4-211ENST00000460408 FERMT3Q86UX7 667 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 CCDC103Q8IW40 242 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 ADGRG2Q8IZP9 1017 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 CLUHP3Q96NS8 147 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 SPATA25Q9BR10 227 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 MRPL4Q9BYD3 311 aaKnown RBP4.98□□□□□ -1.61
RFC4-211ENST00000460408 RNF38Q9H0F5 515 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 GPRC5CQ9NQ84 441 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 USP40Q9NVE5 1235 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 TMEFF2Q9UIK5 374 aaPredicted RBP4.98□□□□□ -1.61
RFC4-211ENST00000460408 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.98□□□□□ -1.61
RFC4-211ENST00000460408 CD2APQ9Y5K6 639 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 NPFFR2Q9Y5X5 522 aa4.98□□□□□ -1.61
RFC4-211ENST00000460408 BLACEA4D250 179 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 AKAP8O43823 692 aaKnown RBP4.97□□□□□ -1.61
RFC4-211ENST00000460408 ATF2P15336 505 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 TNFRSF1AP19438 455 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 KCNJ6P48051 423 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 GYS2P54840 703 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 ADAM17P78536 824 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 DLX2Q07687 328 aaPredicted RBP4.97□□□□□ -1.61
RFC4-211ENST00000460408 FNDC3BQ53EP0 1204 aaKnown RBP4.97□□□□□ -1.61
RFC4-211ENST00000460408 HLA-DQA1Q5Y7H0 255 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 STYK1Q6J9G0 422 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 GSTCDQ8NEC7 633 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 IPO9Q96P70 1041 aaKnown RBP4.97□□□□□ -1.61
RFC4-211ENST00000460408 TRIM39Q9HCM9 518 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 PMF1-BGLAPU3KQ54 211 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 ASXL2Q76L83 1435 aa4.97□□□□□ -1.61
RFC4-211ENST00000460408 A0A1W2PQ27 194 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 A0A1W2PQ64 194 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 A0A1W2PQC6 194 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 A0A1W2PQD8 194 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 RAPGEF3O95398 923 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 ITGB3P05106 788 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 PLS3P13797 630 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 SEPHS1P49903 392 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 GABREP78334 506 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 PABPC4Q13310 644 aaKnown RBP eCLIP4.96□□□□□ -1.62
RFC4-211ENST00000460408 E4F1Q66K89 784 aaPredicted RBP4.96□□□□□ -1.62
RFC4-211ENST00000460408 MBLAC2Q68D91 279 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 PPIL6Q8IXY8 311 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 SLC7A14Q8TBB6 771 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 ZNF526Q8TF50 670 aaPredicted RBP4.96□□□□□ -1.62
RFC4-211ENST00000460408 PTPRN2Q92932 1015 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 NINJ1Q92982 152 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 PTCHD1Q96NR3 888 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 MMP19Q99542 508 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 SLC52A2Q9HAB3 445 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 CLEC1BQ9P126 229 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 PLA2G2DQ9UNK4 145 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 PLAAQ9Y263 795 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 HCFC2Q9Y5Z7 792 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 DUSP10Q9Y6W6 482 aa4.96□□□□□ -1.62
RFC4-211ENST00000460408 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.95□□□□□ -1.62
RFC4-211ENST00000460408 NOBOXO60393 691 aa4.95□□□□□ -1.62
RFC4-211ENST00000460408 CLSTN1O94985 981 aa4.95□□□□□ -1.62
RFC4-211ENST00000460408 PAMP19021 973 aa4.95□□□□□ -1.62
RFC4-211ENST00000460408 ZXDAP98168 799 aa4.95□□□□□ -1.62
RFC4-211ENST00000460408 CYP2R1Q6VVX0 501 aa4.95□□□□□ -1.62
RFC4-211ENST00000460408 MAMDC2Q7Z304 686 aaPredicted RBP4.95□□□□□ -1.62
RFC4-211ENST00000460408 DCAF4Q8WV16 495 aa4.95□□□□□ -1.62
RFC4-211ENST00000460408 RBM15Q96T37 977 aaKnown RBP eCLIP4.95□□□□□ -1.62
RFC4-211ENST00000460408 PDLIM7Q9NR12 457 aa4.95□□□□□ -1.62
RFC4-211ENST00000460408 SFMBT1Q9UHJ3 866 aa4.95□□□□□ -1.62
RFC4-211ENST00000460408 ANKRD62A6NC57 917 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 FAM83GA6ND36 823 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 C1QTNF3-AMACRE9PGA6 284 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 MATN3O15232 486 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 MEFVO15553 781 aaPredicted RBP4.94□□□□□ -1.62
RFC4-211ENST00000460408 NCAM1P13591 858 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 LTBRP36941 435 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 CORO7P57737 925 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 PRR5P85299 388 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 KCNAB2Q13303 367 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 C21orf62-AS1Q17RA5 79 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 INF2Q27J81 1249 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 TM4SF20Q53R12 229 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 KCNT2Q6UVM3 1135 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 RSPO2Q6UXX9 243 aaPredicted RBP4.94□□□□□ -1.62
RFC4-211ENST00000460408 USP53Q70EK8 1073 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 BRAPQ7Z569 592 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 JAMLQ86YT9 394 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms