RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 ADGRF4Q8IZF3 695 aa11.07□□□□□ -0.64
EPB41-208ENST00000460378 ARNTL2Q8WYA1 636 aa11.07□□□□□ -0.64
EPB41-208ENST00000460378 CCDC94Q9BW85 323 aaPredicted RBP11.07□□□□□ -0.64
EPB41-208ENST00000460378 DIS3Q9Y2L1 958 aaKnown RBP11.07□□□□□ -0.64
EPB41-208ENST00000460378 SFNP31947 248 aa11.07□□□□□ -0.64
EPB41-208ENST00000460378 IRF5Q13568 498 aa11.07□□□□□ -0.64
EPB41-208ENST00000460378 SUGP1Q8IWZ8 645 aaKnown RBP11.07□□□□□ -0.64
EPB41-208ENST00000460378 PHKBQ93100 1093 aa11.07□□□□□ -0.64
EPB41-208ENST00000460378 SYNPO2Q9UMS6 1093 aa11.07□□□□□ -0.64
EPB41-208ENST00000460378 RGPD5Q99666 1765 aa11.07□□□□□ -0.64
EPB41-208ENST00000460378 ATP2A2P16615 1042 aaKnown RBP11.06□□□□□ -0.64
EPB41-208ENST00000460378 TNNT3P45378 269 aaPredicted RBP11.06□□□□□ -0.64
EPB41-208ENST00000460378 RPS6P62753 249 aaKnown RBP11.06□□□□□ -0.64
EPB41-208ENST00000460378 TAF2Q6P1X5 1199 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 JPH1Q9HDC5 661 aaPredicted RBP11.06□□□□□ -0.64
EPB41-208ENST00000460378 DDX25Q9UHL0 483 aaKnown RBP11.06□□□□□ -0.64
EPB41-208ENST00000460378 SSX2IPQ9Y2D8 614 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 PSEN2P49810 448 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 IQCEQ6IPM2 695 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 AFG1LQ8WV93 481 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 GOLGA1Q92805 767 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 hCG_1642624A0A1W2PR95 340 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 PFKMP08237 780 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 XRCC5P13010 732 aaKnown RBP11.06□□□□□ -0.64
EPB41-208ENST00000460378 GCFC2P16383 781 aaKnown RBP11.06□□□□□ -0.64
EPB41-208ENST00000460378 KCNA10Q16322 511 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 CAGE1Q8TC20 777 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 GPKOWQ92917 476 aaPredicted RBP eCLIP11.06□□□□□ -0.645e-13■□□□□ 10.6
EPB41-208ENST00000460378 COL3A1P02461 1466 aaPredicted RBP11.06□□□□□ -0.64
EPB41-208ENST00000460378 PTMSP20962 102 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 MFSD10Q14728 455 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 DEFB123Q8N688 67 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 GMCL1Q96IK5 515 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 TOPORSQ9NS56 1045 aaPredicted RBP11.06□□□□□ -0.64
EPB41-208ENST00000460378 STAP2Q9UGK3 403 aa11.06□□□□□ -0.64
EPB41-208ENST00000460378 SLC27A2O14975 620 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 BIRC2Q13490 618 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 MTFR1Q15390 333 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 CEP57Q86XR8 500 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 BLIDQ8IZY5 108 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 KIAA0753Q2KHM9 967 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 PAN2Q504Q3 1202 aaKnown RBP11.05□□□□□ -0.64
EPB41-208ENST00000460378 PPP1R18Q6NYC8 613 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 PSPC1Q8WXF1 523 aaKnown RBP11.05□□□□□ -0.64
EPB41-208ENST00000460378 TSEN34Q9BSV6 310 aaKnown RBP11.05□□□□□ -0.64
EPB41-208ENST00000460378 EMILIN3Q9NT22 766 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 HBP1O60381 514 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 SHMT1P34896 483 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 HAUS6Q7Z4H7 955 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 PCDHA12Q9UN75 941 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 KINO60870 393 aaKnown RBP11.05□□□□□ -0.64
EPB41-208ENST00000460378 FGFR1OPO95684 399 aaKnown RBP11.05□□□□□ -0.64
EPB41-208ENST00000460378 GABRQQ9UN88 632 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 RFX7Q2KHR2 1363 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 ZNF536O15090 1300 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 LRP5O75197 1615 aa11.05□□□□□ -0.64
EPB41-208ENST00000460378 C5P01031 1676 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 SRGAP2CP0DJJ0 459 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 CC2D1AQ6P1N0 951 aaPredicted RBP11.04□□□□□ -0.64
EPB41-208ENST00000460378 LRWD1Q9UFC0 647 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 NEK8Q86SG6 692 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 EMILIN2Q9BXX0 1053 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 ZNF609O15014 1411 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 ABL1P00519 1130 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 DMP1Q13316 513 aaPredicted RBP11.04□□□□□ -0.64
EPB41-208ENST00000460378 OLFML2BQ68BL8 750 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 C17orf99Q6UX52 265 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 SMC5Q8IY18 1101 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 ACSF2Q96CM8 615 aaPredicted RBP11.04□□□□□ -0.64
EPB41-208ENST00000460378 TPM3P06753 285 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 ASGR1P07306 291 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 TGFB3P10600 412 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 VEPH1Q14D04 833 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 GTF3C6Q969F1 213 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 PORCNQ9H237 461 aa11.04□□□□□ -0.64
EPB41-208ENST00000460378 WTIPA6NIX2 430 aaPredicted RBP11.03□□□□□ -0.64
EPB41-208ENST00000460378 PPFIA4O75335 1185 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 P4HA1P13674 534 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 ABCD1P33897 745 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 RDXP35241 583 aaKnown RBP11.03□□□□□ -0.64
EPB41-208ENST00000460378 LIG4P49917 911 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 OTUD7AQ8TE49 926 aaPredicted RBP11.03□□□□□ -0.64
EPB41-208ENST00000460378 TIFAQ96CG3 184 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 COLEC11Q9BWP8 271 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 CHMP5Q9NZZ3 219 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 GBP2P32456 591 aaPredicted RBP11.03□□□□□ -0.64
EPB41-208ENST00000460378 CACNB2Q08289 660 aaPredicted RBP11.03□□□□□ -0.64
EPB41-208ENST00000460378 PPP2R5DQ14738 602 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 SWSAP1Q6NVH7 229 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 LBX2Q6XYB7 198 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 MYOM1P52179 1685 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 SGSM2O43147 1006 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 TADA2AO75478 443 aa11.03□□□□□ -0.64
EPB41-208ENST00000460378 PRPF6O94906 941 aaKnown RBP11.03□□□□□ -0.64
EPB41-208ENST00000460378 URODP06132 367 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms