RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 TLR2O60603 784 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 PPFIA4O75335 1185 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 NDUFB10O96000 172 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 LIFRP42702 1097 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 CTCFP49711 727 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-203ENST00000460097 MCM6Q14566 821 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 KARSQ15046 597 aaKnown RBP17.6■□□□□ 0.41
CMTM3-203ENST00000460097 APOA5Q6Q788 366 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 NOSTRINQ8IVI9 506 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 ANKS1AQ92625 1134 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 RPGRIP1Q96KN7 1286 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-203ENST00000460097 GEMIN8Q9NWZ8 242 aaKnown RBP17.6■□□□□ 0.41
CMTM3-203ENST00000460097 ADD3Q9UEY8 706 aaKnown RBP17.6■□□□□ 0.41
CMTM3-203ENST00000460097 CEP131Q9UPN4 1083 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 TNKSO95271 1327 aa17.6■□□□□ 0.41
CMTM3-203ENST00000460097 LOC285556D6RIA3 1793 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 ERICH2A1L162 156 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 TARSL2A2RTX5 802 aaKnown RBP17.59■□□□□ 0.41
CMTM3-203ENST00000460097 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
CMTM3-203ENST00000460097 SART3Q15020 963 aaKnown RBP17.59■□□□□ 0.41
CMTM3-203ENST00000460097 TTC31Q49AM3 519 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-203ENST00000460097 MAP9Q49MG5 647 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 FILIP1LQ4L180 1135 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 SLFN13Q68D06 897 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 EFCAB13Q8IY85 973 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 ENAHQ8N8S7 591 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-203ENST00000460097 IGSF22Q8N9C0 903 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-203ENST00000460097 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 DESI2Q9BSY9 194 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 MTA3Q9BTC8 594 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 GJB4Q9NTQ9 266 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 FAN1Q9Y2M0 1017 aa17.59■□□□□ 0.41
CMTM3-203ENST00000460097 SRPRBQ9Y5M8 271 aaKnown RBP17.59■□□□□ 0.41
CMTM3-203ENST00000460097 SOWAHDA6NJG2 315 aa17.58■□□□□ 0.41
CMTM3-203ENST00000460097 EIF3CLB5ME19 914 aaKnown RBP17.58■□□□□ 0.41
CMTM3-203ENST00000460097 ACTN4O43707 911 aaKnown RBP17.58■□□□□ 0.41
CMTM3-203ENST00000460097 PPFIA3O75145 1194 aa17.58■□□□□ 0.41
CMTM3-203ENST00000460097 RCAN1P53805 252 aa17.58■□□□□ 0.41
CMTM3-203ENST00000460097 AMPD2Q01433 879 aa17.58■□□□□ 0.41
CMTM3-203ENST00000460097 ZNF662Q6ZS27 426 aa17.58■□□□□ 0.41
CMTM3-203ENST00000460097 SUGP1Q8IWZ8 645 aaKnown RBP17.58■□□□□ 0.41
CMTM3-203ENST00000460097 MED15Q96RN5 788 aa17.58■□□□□ 0.41
CMTM3-203ENST00000460097 P2RX7Q99572 595 aaKnown RBP17.58■□□□□ 0.41
CMTM3-203ENST00000460097 EIF3CQ99613 913 aaKnown RBP17.58■□□□□ 0.41
CMTM3-203ENST00000460097 TANGO6Q9C0B7 1094 aa17.58■□□□□ 0.41
CMTM3-203ENST00000460097 MYH4Q9Y623 1939 aa17.58■□□□□ 0.41
CMTM3-203ENST00000460097 LRRC10BA6NIK2 292 aa17.58■□□□□ 0.4
CMTM3-203ENST00000460097 FMNL1O95466 1100 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-203ENST00000460097 GYS2P54840 703 aa17.58■□□□□ 0.4
CMTM3-203ENST00000460097 SAFBQ15424 915 aaKnown RBP eCLIP17.58■□□□□ 0.4
CMTM3-203ENST00000460097 ZNF569Q5MCW4 686 aa17.58■□□□□ 0.4
CMTM3-203ENST00000460097 FAM83BQ5T0W9 1011 aa17.58■□□□□ 0.4
CMTM3-203ENST00000460097 IFIT1BQ5T764 474 aaKnown RBP17.58■□□□□ 0.4
CMTM3-203ENST00000460097 KAT14Q9H8E8 782 aa17.58■□□□□ 0.4
CMTM3-203ENST00000460097 HOXC10Q9NYD6 342 aa17.58■□□□□ 0.4
CMTM3-203ENST00000460097 GPR25O00155 361 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 ZBTB43O43298 467 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 HSPA8P11142 646 aaKnown RBP17.57■□□□□ 0.4
CMTM3-203ENST00000460097 IFNAR1P17181 557 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 SLC1A4P43007 532 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 VSNL1P62760 191 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 RBL2Q08999 1139 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 CUL4BQ13620 913 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 COG2Q14746 738 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 SEC23AQ15436 765 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 LRRC31Q6UY01 552 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 RUBCNQ92622 972 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 GMCL1Q96IK5 515 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 NUP88Q99567 741 aaPredicted RBP17.57■□□□□ 0.4
CMTM3-203ENST00000460097 MTMR7Q9Y216 660 aa17.57■□□□□ 0.4
CMTM3-203ENST00000460097 FLOT1O75955 427 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 MMP1P03956 469 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 BMP3P12645 472 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 GUCY2CP25092 1073 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 GCLCP48506 637 aaPredicted RBP17.56■□□□□ 0.4
CMTM3-203ENST00000460097 HERVK_113P62684 666 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 MTF1Q14872 753 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 WTAPQ15007 396 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 TMEM67Q5HYA8 995 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 C17orf99Q6UX52 265 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 SH3RF1Q7Z6J0 888 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 IGDCC4Q8TDY8 1250 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 LZTFL1Q9NQ48 299 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 SAMSN1Q9NSI8 373 aaKnown RBP17.56■□□□□ 0.4
CMTM3-203ENST00000460097 PUF60Q9UHX1 559 aaKnown RBP17.56■□□□□ 0.4
CMTM3-203ENST00000460097 CPA4Q9UI42 421 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 SHOX2O60902 331 aaPredicted RBP17.56■□□□□ 0.4
CMTM3-203ENST00000460097 PRPF6O94906 941 aaKnown RBP17.56■□□□□ 0.4
CMTM3-203ENST00000460097 LBX1P52954 281 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 SPAG1Q07617 926 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 PNMA1Q8ND90 353 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 CCDC148Q8NFR7 591 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 GSDMAQ96QA5 445 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 SERTAD1Q9UHV2 236 aa17.56■□□□□ 0.4
CMTM3-203ENST00000460097 POLR2DO15514 142 aaKnown RBP17.55■□□□□ 0.4
CMTM3-203ENST00000460097 SSRP1Q08945 709 aaKnown RBP17.55■□□□□ 0.4
CMTM3-203ENST00000460097 CYP26C1Q6V0L0 522 aa17.55■□□□□ 0.4
CMTM3-203ENST00000460097 SLC35F6Q8N357 371 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms