RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 CDC27P30260 824 aa21.31■■□□□ 1
HOXD3-204ENST00000459979 CPT1AP50416 773 aa21.31■■□□□ 1
HOXD3-204ENST00000459979 APOBRQ0VD83 1088 aa21.31■■□□□ 1
HOXD3-204ENST00000459979 GAS2L1Q99501 681 aaPredicted RBP21.31■■□□□ 1
HOXD3-204ENST00000459979 NOC4LQ9BVI4 516 aaKnown RBP21.31■■□□□ 1
HOXD3-204ENST00000459979 WNT8AQ9H1J5 351 aa21.31■■□□□ 1
HOXD3-204ENST00000459979 DDX41Q9UJV9 622 aaKnown RBP21.31■■□□□ 1
HOXD3-204ENST00000459979 RGS20O76081 388 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 METAP2P50579 478 aaKnown RBP eCLIP21.3■■□□□ 1
HOXD3-204ENST00000459979 KCNV1Q6PIU1 500 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 SEPT14Q6ZU15 432 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 FCHSD1Q86WN1 690 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 OR6J1Q8NGC5 347 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 PPP1R13LQ8WUF5 828 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 CUL5Q93034 780 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 SCLYQ96I15 445 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 PSTPIP2Q9H939 334 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 POLR3EQ9NVU0 708 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 YBX2Q9Y2T7 364 aaKnown RBP21.3■■□□□ 1
HOXD3-204ENST00000459979 CYP46A1Q9Y6A2 500 aa21.3■■□□□ 1
HOXD3-204ENST00000459979 hCG_1642624A0A1W2PR95 340 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 hCG_1984214I3L0E3 225 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 KPNA6O60684 536 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 STAM2O75886 525 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 TGFB3P10600 412 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 ADD1P35611 737 aaKnown RBP21.29■■□□□ 1
HOXD3-204ENST00000459979 RABGGTBP53611 331 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 ANAPC15P60006 121 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 ADGRE1Q14246 886 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 BRDTQ58F21 947 aaPredicted RBP21.29■■□□□ 1
HOXD3-204ENST00000459979 XRRA1Q6P2D8 792 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 USP17L6PQ6QN14 398 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 ZNF713Q8N859 430 aaPredicted RBP21.29■■□□□ 1
HOXD3-204ENST00000459979 IL31RAQ8NI17 732 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 COPS5Q92905 334 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 EMID1Q96A84 441 aaPredicted RBP21.29■■□□□ 1
HOXD3-204ENST00000459979 IL17RAQ96F46 866 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 MSRAQ9UJ68 235 aa21.29■■□□□ 1
HOXD3-204ENST00000459979 V9GY48 417 aaPredicted RBP21.29■■□□□ 1
HOXD3-204ENST00000459979 SPTBN5Q9NRC6 3674 aaKnown RBP21.28■■□□□ 1
HOXD3-204ENST00000459979 GH1P01241 217 aa21.28■■□□□ 1
HOXD3-204ENST00000459979 MYCLP12524 364 aaPredicted RBP21.28■■□□□ 1
HOXD3-204ENST00000459979 CCND2P30279 289 aa21.28■■□□□ 1
HOXD3-204ENST00000459979 PURAQ00577 322 aaKnown RBP21.28■■□□□ 1
HOXD3-204ENST00000459979 RAB30Q15771 203 aa21.28■■□□□ 1
HOXD3-204ENST00000459979 CCDC85BQ15834 202 aaPredicted RBP21.28■■□□□ 1
HOXD3-204ENST00000459979 PPP1R18Q6NYC8 613 aa21.28■■□□□ 1
HOXD3-204ENST00000459979 SMARCC2Q8TAQ2 1214 aa21.28■■□□□ 1
HOXD3-204ENST00000459979 ALDH8A1Q9H2A2 487 aaPredicted RBP21.28■■□□□ 1
HOXD3-204ENST00000459979 MTIF3Q9H2K0 278 aaKnown RBP21.28■■□□□ 1
HOXD3-204ENST00000459979 TRMT13Q9NUP7 481 aaKnown RBP21.28■■□□□ 1
HOXD3-204ENST00000459979 SCN10AQ9Y5Y9 1956 aa21.28■■□□□ 1
HOXD3-204ENST00000459979 MYL3P08590 195 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 CYP2C9P11712 490 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 IGFBP4P22692 258 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 ARHGAP1Q07960 439 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 TOB2Q14106 344 aaPredicted RBP21.27■■□□□ 1
HOXD3-204ENST00000459979 LY6KQ17RY6 165 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 TJAP1Q5JTD0 557 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 WWC2Q6AWC2 1192 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 HEATR3Q7Z4Q2 680 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 SYMPKQ92797 1274 aaKnown RBP21.27■■□□□ 1
HOXD3-204ENST00000459979 VWCEQ96DN2 955 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 MRVI1Q9Y6F6 885 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 MYH7BA7E2Y1 1941 aa21.27■■□□□ 1
HOXD3-204ENST00000459979 MYOGP15173 224 aa21.26■□□□□ 0.99
HOXD3-204ENST00000459979 PDIA3P30101 505 aaKnown RBP21.26■□□□□ 0.99
HOXD3-204ENST00000459979 ICAM3P32942 547 aa21.26■□□□□ 0.99
HOXD3-204ENST00000459979 MRPS9P82933 396 aaKnown RBP21.26■□□□□ 0.99
HOXD3-204ENST00000459979 PCNX4Q63HM2 1172 aa21.26■□□□□ 0.99
HOXD3-204ENST00000459979 GPKOWQ92917 476 aaPredicted RBP eCLIP21.26■□□□□ 0.99
HOXD3-204ENST00000459979 INPP4AQ96PE3 977 aaPredicted RBP21.26■□□□□ 0.99
HOXD3-204ENST00000459979 MTG1Q9BT17 334 aaPredicted RBP21.26■□□□□ 0.99
HOXD3-204ENST00000459979 NAP1L2Q9ULW6 460 aaPredicted RBP21.26■□□□□ 0.99
HOXD3-204ENST00000459979 TRIP12Q14669 1992 aaPredicted RBP21.25■□□□□ 0.99
HOXD3-204ENST00000459979 ZBBXA8MT70 800 aa21.25■□□□□ 0.99
HOXD3-204ENST00000459979 LAMC2Q13753 1193 aa21.25■□□□□ 0.99
HOXD3-204ENST00000459979 NTRK3Q16288 839 aa21.25■□□□□ 0.99
HOXD3-204ENST00000459979 PFKFB3Q16875 520 aaPredicted RBP21.25■□□□□ 0.99
HOXD3-204ENST00000459979 TYW1BQ6NUM6 668 aa21.25■□□□□ 0.99
HOXD3-204ENST00000459979 ZNF274Q96GC6 653 aaPredicted RBP21.25■□□□□ 0.99
HOXD3-204ENST00000459979 TANC1Q9C0D5 1861 aa21.25■□□□□ 0.99
HOXD3-204ENST00000459979 SLC28A3Q9HAS3 691 aa21.25■□□□□ 0.99
HOXD3-204ENST00000459979 RIC8AQ9NPQ8 531 aa21.25■□□□□ 0.99
HOXD3-204ENST00000459979 BARHL2Q9NY43 387 aa21.25■□□□□ 0.99
HOXD3-204ENST00000459979 STXBP3O00186 592 aa21.24■□□□□ 0.99
HOXD3-204ENST00000459979 PRPF3O43395 683 aaKnown RBP21.24■□□□□ 0.99
HOXD3-204ENST00000459979 NAPAP54920 295 aa21.24■□□□□ 0.99
HOXD3-204ENST00000459979 GNPTABQ3T906 1256 aa21.24■□□□□ 0.99
HOXD3-204ENST00000459979 DEFB128Q7Z7B8 93 aa21.24■□□□□ 0.99
HOXD3-204ENST00000459979 AFG1LQ8WV93 481 aa21.24■□□□□ 0.99
HOXD3-204ENST00000459979 UPF3BQ9BZI7 483 aaKnown RBP21.24■□□□□ 0.99
HOXD3-204ENST00000459979 GLT8D2Q9H1C3 349 aa21.24■□□□□ 0.99
HOXD3-204ENST00000459979 SLC4A7Q9Y6M7 1214 aa21.24■□□□□ 0.99
HOXD3-204ENST00000459979 SPATA31C2B4DYI2 1134 aa21.23■□□□□ 0.99
HOXD3-204ENST00000459979 MMP3P08254 477 aa21.23■□□□□ 0.99
HOXD3-204ENST00000459979 HOXD8P13378 290 aaPredicted RBP21.23■□□□□ 0.99
HOXD3-204ENST00000459979 IFNAR1P17181 557 aa21.23■□□□□ 0.99
HOXD3-204ENST00000459979 FAM47CQ5HY64 1035 aa21.23■□□□□ 0.99
HOXD3-204ENST00000459979 MYSM1Q5VVJ2 828 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms