RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SAMD11Q96NU1 681 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 NSUN3Q9H649 340 aaKnown RBP9.23□□□□□ -0.93
HPS4-207ENST00000459918 ABCB11O95342 1321 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 C5orf42Q9H799 3197 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 ATMINO43313 823 aaPredicted RBP9.22□□□□□ -0.93
HPS4-207ENST00000459918 CFBP00751 764 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 CTSHP09668 335 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 MYCLP12524 364 aaPredicted RBP9.22□□□□□ -0.93
HPS4-207ENST00000459918 MX1P20591 662 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 CTNNB1P35222 781 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 LAMC2Q13753 1193 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 TCTN1Q2MV58 587 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 TCEAL5Q5H9L2 206 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 GPATCH4Q5T3I0 446 aaKnown RBP9.22□□□□□ -0.93
HPS4-207ENST00000459918 VPS53Q5VIR6 699 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 CCDC62Q6P9F0 684 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 MFSD6Q6ZSS7 791 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 DBF4BQ8NFT6 615 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 PPTC7Q8NI37 304 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 SEPT8Q92599 483 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 KAT2BQ92831 832 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 PABPC5Q96DU9 382 aaKnown RBP9.22□□□□□ -0.93
HPS4-207ENST00000459918 MFSD14AQ96MC6 490 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 TAAR1Q96RJ0 339 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 POP1Q99575 1024 aaKnown RBP9.22□□□□□ -0.93
HPS4-207ENST00000459918 ZKSCAN3Q9BRR0 538 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 IFIH1Q9BYX4 1025 aaKnown RBP9.22□□□□□ -0.93
HPS4-207ENST00000459918 UBA5Q9GZZ9 404 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 CPVLQ9H3G5 476 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 KAT14Q9H8E8 782 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 ANAPC4Q9UJX5 808 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 RCAN3Q9UKA8 241 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 CCDC171Q6TFL3 1326 aa9.22□□□□□ -0.93
HPS4-207ENST00000459918 C17orf102A2RUQ5 167 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 NOP56O00567 594 aaKnown RBP9.21□□□□□ -0.94
HPS4-207ENST00000459918 EIF3JO75822 258 aaKnown RBP9.21□□□□□ -0.94
HPS4-207ENST00000459918 F2P00734 622 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 ZNF200P98182 395 aaPredicted RBP9.21□□□□□ -0.94
HPS4-207ENST00000459918 ZP2Q05996 745 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 RBL2Q08999 1139 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 GPNMBQ14956 572 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 FBXO11Q86XK2 927 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 ADHFE1Q8IWW8 467 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 TMEM192Q8IY95 271 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 PI4K2BQ8TCG2 481 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 NEK9Q8TD19 979 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 SYTL5Q8TDW5 730 aaPredicted RBP9.21□□□□□ -0.94
HPS4-207ENST00000459918 ESR2Q92731 530 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 ATP6V0A1Q93050 837 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 SPATA33Q96N06 139 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 CTAGE1Q96RT6 745 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 IWS1Q96ST2 819 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 KCNH6Q9H252 994 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 IGFLR1Q9H665 355 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 DCTPP1Q9H773 170 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 MLXIPQ9HAP2 919 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 VAT1LQ9HCJ6 419 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 PRKAG3Q9UGI9 489 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 MRPL11Q9Y3B7 192 aaKnown RBP9.21□□□□□ -0.94
HPS4-207ENST00000459918 LAMA4Q16363 1823 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 ATG2AQ2TAZ0 1938 aa9.21□□□□□ -0.94
HPS4-207ENST00000459918 DOCK5Q9H7D0 1870 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 TRIM6-TRIM34B2RNG4 842 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 H3BNC9 293 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 RBAK-RBAKDNI3L0D1 243 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 NCK2O43639 380 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 GGPS1O95749 300 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 HSPD1P10809 573 aaKnown RBP9.2□□□□□ -0.94
HPS4-207ENST00000459918 HTRA4P83105 476 aaPredicted RBP9.2□□□□□ -0.94
HPS4-207ENST00000459918 MBTPS1Q14703 1052 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 C20orf194Q5TEA3 1177 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 HFE2Q6ZVN8 426 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 RPAINQ86UA6 219 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 IQCA1Q86XH1 822 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 SUGP1Q8IWZ8 645 aaKnown RBP9.2□□□□□ -0.94
HPS4-207ENST00000459918 FIBCD1Q8N539 461 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 PNMA1Q8ND90 353 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 RGS22Q8NE09 1264 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 OTUD7AQ8TE49 926 aaPredicted RBP9.2□□□□□ -0.94
HPS4-207ENST00000459918 TBC1D5Q92609 795 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 WNT8BQ93098 351 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 EVI5LQ96CN4 794 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 TTC14Q96N46 770 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 RNF41Q9H4P4 317 aaPredicted RBP9.2□□□□□ -0.94
HPS4-207ENST00000459918 HELLSQ9NRZ9 838 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 TCP11L1Q9NUJ3 509 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 COL20A1Q9P218 1284 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 MUTYHQ9UIF7 546 aa9.2□□□□□ -0.94
HPS4-207ENST00000459918 DDX41Q9UJV9 622 aaKnown RBP9.2□□□□□ -0.94
HPS4-207ENST00000459918 FOXP2O15409 715 aa9.19□□□□□ -0.94
HPS4-207ENST00000459918 PPFIA4O75335 1185 aa9.19□□□□□ -0.94
HPS4-207ENST00000459918 FGAP02671 866 aa9.19□□□□□ -0.94
HPS4-207ENST00000459918 NR3C2P08235 984 aa9.19□□□□□ -0.94
HPS4-207ENST00000459918 PARP1P09874 1014 aaKnown RBP9.19□□□□□ -0.94
HPS4-207ENST00000459918 IRS1P35568 1242 aa9.19□□□□□ -0.94
HPS4-207ENST00000459918 NOVP48745 357 aa9.19□□□□□ -0.94
HPS4-207ENST00000459918 NDUFV1P49821 464 aa9.19□□□□□ -0.94
HPS4-207ENST00000459918 TRIM71Q2Q1W2 868 aaKnown RBP9.19□□□□□ -0.94
HPS4-207ENST00000459918 QRICH1Q2TAL8 776 aa9.19□□□□□ -0.94
HPS4-207ENST00000459918 MCMDC2Q4G0Z9 681 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms