RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 GPATCH3Q96I76 525 aa13.23□□□□□ -0.29
PRAMEF35P-201ENST00000458709 LNPKQ9C0E8 428 aa13.23□□□□□ -0.29
PRAMEF35P-201ENST00000458709 FAM50BQ9Y247 325 aa13.23□□□□□ -0.29
PRAMEF35P-201ENST00000458709 H3BNC9 293 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 AMHP03971 560 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 ZNF286BP0CG31 522 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 LTBRP36941 435 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 PSEN2P49810 448 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 GPM6BQ13491 265 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 HIC1Q14526 733 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 MFSD10Q14728 455 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 CLUL1Q15846 466 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 RPAINQ86UA6 219 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 OTUD7AQ8TE49 926 aaPredicted RBP13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 MFSD14AQ96MC6 490 aa13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 NSUN3Q9H649 340 aaKnown RBP13.22□□□□□ -0.29
PRAMEF35P-201ENST00000458709 WDR19Q8NEZ3 1342 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 B4DLN1 442 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 HAS3O00219 553 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 F2P00734 622 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 PDHBP11177 359 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 MRPL12P52815 198 aaKnown RBP13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 DGKDQ16760 1214 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 USH1GQ495M9 461 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 FBXO11Q86XK2 927 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 TMEM192Q8IY95 271 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 SAMD11Q96NU1 681 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 YME1L1Q96TA2 773 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 COL20A1Q9P218 1284 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 GTF3C3Q9Y5Q9 886 aa13.21□□□□□ -0.29
PRAMEF35P-201ENST00000458709 MICAL3Q7RTP6 2002 aa13.2□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
PRAMEF35P-201ENST00000458709 DLX2Q07687 328 aaPredicted RBP13.2□□□□□ -0.3
PRAMEF35P-201ENST00000458709 SMAD2Q15796 467 aaKnown RBP13.2□□□□□ -0.3
PRAMEF35P-201ENST00000458709 HERC4Q5GLZ8 1057 aaPredicted RBP13.2□□□□□ -0.3
PRAMEF35P-201ENST00000458709 IER5LQ5T953 404 aa13.2□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TBC1D5Q92609 795 aa13.2□□□□□ -0.3
PRAMEF35P-201ENST00000458709 KATNAL1Q9BW62 490 aa13.2□□□□□ -0.3
PRAMEF35P-201ENST00000458709 C5orf42Q9H799 3197 aa13.2□□□□□ -0.3
PRAMEF35P-201ENST00000458709 EMSYQ7Z589 1322 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 COL4A6Q14031 1691 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 MBTPS2O43462 519 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 ORC4O43929 436 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 UPP2O95045 317 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 THPOP40225 353 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 ZNF543Q08ER8 600 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 PLEKHG4Q58EX7 1191 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 BMP2KLQ5H9B9 411 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 SYTL5Q8TDW5 730 aaPredicted RBP13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 FSD1Q9BTV5 496 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 OSBPL7Q9BZF2 842 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 CPVLQ9H3G5 476 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TOMM22Q9NS69 142 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 DDX41Q9UJV9 622 aaKnown RBP13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 PNMA2Q9UL42 364 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TECTAO75443 2155 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TRIOO75962 3097 aa13.19□□□□□ -0.3
PRAMEF35P-201ENST00000458709 USP34Q70CQ2 3546 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 ATG2AQ2TAZ0 1938 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 RSPH10B2B2RC85 870 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 ST18O60284 1047 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 SORBS3O60504 671 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TBX10O75333 385 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 CSPG5O95196 566 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 RSPH10BP0C881 870 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 HYAL1Q12794 435 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 CTC1Q2NKJ3 1217 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 SERINC5Q86VE9 423 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 DHX37Q8IY37 1157 aaKnown RBP13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 PPTC7Q8NI37 304 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TOP1MTQ969P6 601 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 EMID1Q96A84 441 aaPredicted RBP13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 POP1Q99575 1024 aaKnown RBP13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 ANAPC4Q9UJX5 808 aa13.18□□□□□ -0.3
PRAMEF35P-201ENST00000458709 NLRC5Q86WI3 1866 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 FGRP09769 529 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 GOLGA8HP0CJ92 632 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 SNHG28P0DPA3 235 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 CTNNB1P35222 781 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 GTF2F1P35269 517 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 PTPN5P54829 565 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TCF15Q12870 199 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 STXBP2Q15833 593 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TTC22Q5TAA0 569 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 NSUN6Q8TEA1 469 aaKnown RBP13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 EDAQ92838 391 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms