RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 ATP6V1G1O75348 118 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 MTRF1O75570 445 aaKnown RBP6.21□□□□□ -1.42
HMGB4-202ENST00000458277 PDCP20941 246 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 EIF4BP23588 611 aaKnown RBP6.21□□□□□ -1.42
HMGB4-202ENST00000458277 CHMP4BP1P59074 171 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 ARPC4P59998 168 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 PHEXP78562 749 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 ADCY1Q08828 1119 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 FAM69CQ0P6D2 419 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 FOXD4Q12950 439 aaPredicted RBP6.21□□□□□ -1.42
HMGB4-202ENST00000458277 ZBTB17Q13105 803 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 STX1AQ16623 288 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 RTN1Q16799 776 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 IQCEQ6IPM2 695 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 PRPF40BQ6NWY9 871 aaKnown RBP6.21□□□□□ -1.42
HMGB4-202ENST00000458277 KIAA0825Q8IV33 1275 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 CCDC13Q8IYE1 715 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 ARFGAP2Q8N6H7 521 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 CCDC148Q8NFR7 591 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 PPP1R14CQ8TAE6 165 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 MAIP1Q8WWC4 291 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 SREK1Q8WXA9 508 aaKnown RBP6.21□□□□□ -1.42
HMGB4-202ENST00000458277 YIPF2Q9BWQ6 316 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 CENPHQ9H3R5 247 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 SLC40A1Q9NP59 571 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 SLC39A2Q9NP94 309 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 ANO10Q9NW15 660 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 ZNF510Q9Y2H8 683 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 C15orf41Q9Y2V0 281 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 SSH2Q76I76 1423 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 TTC37Q6PGP7 1564 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 SH3TC1Q8TE82 1336 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 CDHR2Q9BYE9 1310 aa6.21□□□□□ -1.42
HMGB4-202ENST00000458277 USP17L5A8MUK1 530 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 TTI1O43156 1089 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 ARHGAP6O43182 974 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 TRIM37O94972 964 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 PAPLNO95428 1278 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 PSAPP07602 524 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 GSTA1P08263 222 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 EPB41P11171 864 aaKnown RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 GNAT1P11488 350 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 FOSL1P15407 271 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 ARSDP51689 593 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 USP11P51784 963 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 CCNG1P51959 295 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 KRT85P78386 507 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 TMF1P82094 1093 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 MXRA7P84157 204 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 XRCC4Q13426 336 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 STIM1Q13586 685 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 BYSLQ13895 437 aaKnown RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 SEPT7Q16181 437 aaKnown RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 LACTB2Q53H82 288 aaPredicted RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 THEMIS2Q5TEJ8 643 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 GIMAP6Q6P9H5 292 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 CACNA2D4Q7Z3S7 1137 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 CCDC146Q8IYE0 955 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 CEP57L1Q8IYX8 460 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 C1orf131Q8NDD1 294 aaKnown RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 SCG3Q8WXD2 468 aaKnown RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 IRGQQ8WZA9 623 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 OSBPL1AQ9BXW6 950 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 TRMT1Q9NXH9 659 aaKnown RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 KLK14Q9P0G3 267 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 LARSQ9P2J5 1176 aaKnown RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 WDR35Q9P2L0 1181 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 CFDP1Q9UEE9 299 aaPredicted RBP6.2□□□□□ -1.42
HMGB4-202ENST00000458277 SSX2IPQ9Y2D8 614 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 LAMC1P11047 1609 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 UBN2Q6ZU65 1347 aa6.2□□□□□ -1.42
HMGB4-202ENST00000458277 RGS12O14924 1447 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 UNCXA6NJT0 531 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 TMEM110-MUSTN1A8MSY1 372 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 MYO1FO00160 1098 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 LSM1O15116 133 aaKnown RBP6.19□□□□□ -1.42
HMGB4-202ENST00000458277 P4HA2O15460 535 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 DDX3YO15523 660 aaKnown RBP6.19□□□□□ -1.42
HMGB4-202ENST00000458277 AP5Z1O43299 807 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 PRPF6O94906 941 aaKnown RBP6.19□□□□□ -1.42
HMGB4-202ENST00000458277 PRNPP04156 253 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 TOP1P11387 765 aaKnown RBP6.19□□□□□ -1.42
HMGB4-202ENST00000458277 RASA1P20936 1047 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 S100A1P23297 94 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 CCND1P24385 295 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 PREPP48147 710 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 ACADVLP49748 655 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 HDAC4P56524 1084 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 TUBA1BP68363 451 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 CLDN10P78369 228 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 PKP1Q13835 747 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 SPIDRQ14159 915 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 MYBPC3Q14896 1274 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 IFI16Q16666 785 aaKnown RBP6.19□□□□□ -1.42
HMGB4-202ENST00000458277 CCDC153Q494R4 210 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 ANO6Q4KMQ2 910 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 RNF187Q5TA31 235 aaPredicted RBP6.19□□□□□ -1.42
HMGB4-202ENST00000458277 EMC10Q5UCC4 262 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 ALS2CLQ60I27 953 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms