RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC43-202ENST00000457422 TMOD2Q9NZR1 351 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 KIAA1024Q9UPX6 916 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 POTEB3A0JP26 581 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 CLRN2A0PK11 232 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 POTECB2RU33 542 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 SSBP05455 408 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC43-202ENST00000457422 PLA2G4BP0C869 781 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 CIITAP33076 1130 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 LRRC41Q15345 812 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 FAM26FQ5R3K3 315 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 HAUS3Q68CZ6 603 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 POTEBQ6S5H4 581 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 MYOCDQ8IZQ8 938 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 LENG9Q96B70 501 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 NDST4Q9H3R1 872 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 AGPAT5Q9NUQ2 364 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 PANK4Q9NVE7 773 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 CDC23Q9UJX2 597 aa18.54■□□□□ 0.56
CCDC43-202ENST00000457422 CTAGE9A4FU28 777 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 SPDYE3A6NKU9 549 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 E9PMD0 336 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 RAD17O75943 681 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 ABL1P00519 1130 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 CBX1P83916 185 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 CCDC170Q8IYT3 715 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 SPICE1Q8N0Z3 855 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 SLC35F6Q8N357 371 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 GMLQ99445 158 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 PSMD1Q99460 953 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 HAUS4Q9H6D7 363 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 ARGLU1Q9NWB6 273 aaPredicted RBP18.53■□□□□ 0.56
CCDC43-202ENST00000457422 ZNHIT6Q9NWK9 470 aaKnown RBP18.53■□□□□ 0.56
CCDC43-202ENST00000457422 FAM53CQ9NYF3 392 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 STK24Q9Y6E0 443 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 GOLGB1Q14789 3259 aaKnown RBP18.53■□□□□ 0.56
CCDC43-202ENST00000457422 FRMD3A2A2Y4 597 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 PIK3CDO00329 1044 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 OPLAHO14841 1288 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 HNRNPH3P31942 346 aaKnown RBP18.53■□□□□ 0.56
CCDC43-202ENST00000457422 CLCN6P51797 869 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 PRR16Q569H4 304 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 CCDC65Q8IXS2 484 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 GPR161Q8N6U8 529 aaKnown RBP18.53■□□□□ 0.56
CCDC43-202ENST00000457422 FAM151AQ8WW52 585 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 PCMTD1Q96MG8 357 aaPredicted RBP18.53■□□□□ 0.56
CCDC43-202ENST00000457422 ARHGEF10LQ9HCE6 1279 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 SIK3Q9Y2K2 1263 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 PCDHA2Q9Y5H9 948 aa18.53■□□□□ 0.56
CCDC43-202ENST00000457422 PITPNM2Q9BZ72 1349 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 COL4A5P29400 1685 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 PSMD14O00487 310 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 MED24O75448 989 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 VIL1P09327 827 aaKnown RBP18.52■□□□□ 0.56
CCDC43-202ENST00000457422 CYLC1P35663 651 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-202ENST00000457422 ECE1P42892 770 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 KRT83P78385 493 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 TRAF1Q13077 416 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 RTKN2Q8IZC4 609 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 UBE2Q2Q8WVN8 375 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 FAM20AQ96MK3 541 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 NAPGQ99747 312 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-202ENST00000457422 PDGFDQ9GZP0 370 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-202ENST00000457422 ZNF446Q9NWS9 450 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 ZNF70Q9UC06 446 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-202ENST00000457422 PRR12Q9ULL5 1215 aa18.52■□□□□ 0.56
CCDC43-202ENST00000457422 CYP3A4P08684 503 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 CYP11B2P19099 503 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 HERVK_113P62684 666 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 CCDC84Q86UT8 332 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-202ENST00000457422 GPBP1Q86WP2 473 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 TTLL6Q8N841 843 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 CEP112Q8N8E3 955 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 ERMNQ8TAM6 284 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 RABGGTAQ92696 567 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 GOLGA1Q92805 767 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 TMX2Q9Y320 296 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 EIF3CLB5ME19 914 aaKnown RBP18.51■□□□□ 0.55
CCDC43-202ENST00000457422 STAT2P52630 851 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 SLC12A3P55017 1021 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 FKBP3Q00688 224 aaKnown RBP18.51■□□□□ 0.55
CCDC43-202ENST00000457422 KIAA1755Q5JYT7 1200 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 SRGAP1Q7Z6B7 1085 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 SMAP1Q8IYB5 467 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-202ENST00000457422 ACER1Q8TDN7 264 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 EIF3CQ99613 913 aaKnown RBP18.51■□□□□ 0.55
CCDC43-202ENST00000457422 ZNF277Q9NRM2 450 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-202ENST00000457422 HDAC9Q9UKV0 1011 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 CNTNAP1P78357 1384 aa18.51■□□□□ 0.55
CCDC43-202ENST00000457422 NPHP3-ACAD11A0A0J9YXS1 232 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 POTEFA5A3E0 1075 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 FAM86B1E9PN63 330 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 KIF20AO95235 890 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 FAM86B2P0C5J1 330 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 POTEIP0CG38 1075 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 RPA1P27694 616 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 HOXA13P31271 388 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-202ENST00000457422 DLGAP5Q15398 846 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 KIF4BQ2VIQ3 1234 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 POTEGQ6S5H5 508 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms