RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SUPT20HL2P0C7V6 817 aa26.54■■□□□ 1.84
CBX3-204ENST00000456948 MRPS9P82933 396 aaKnown RBP26.54■■□□□ 1.84
CBX3-204ENST00000456948 SSRP1Q08945 709 aaKnown RBP26.54■■□□□ 1.84
CBX3-204ENST00000456948 FAAP100Q0VG06 881 aa26.54■■□□□ 1.84
CBX3-204ENST00000456948 AP3B2Q13367 1082 aa26.54■■□□□ 1.84
CBX3-204ENST00000456948 CELF3Q5SZQ8 465 aaKnown RBP26.54■■□□□ 1.84
CBX3-204ENST00000456948 CCDC148Q8NFR7 591 aa26.54■■□□□ 1.84
CBX3-204ENST00000456948 PPTC7Q8NI37 304 aa26.54■■□□□ 1.84
CBX3-204ENST00000456948 BICD2Q8TD16 824 aa26.54■■□□□ 1.84
CBX3-204ENST00000456948 SPATA31C2B4DYI2 1134 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 MAFGO15525 162 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 PPFIA4O75335 1185 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 RGS20O76081 388 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 GGPS1O95749 300 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 MMP3P08254 477 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 MYSM1Q5VVJ2 828 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 PHKBQ93100 1093 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 SPATA33Q96N06 139 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 KATNAL1Q9BW62 490 aa26.53■■□□□ 1.84
CBX3-204ENST00000456948 SLKQ9H2G2 1235 aaPredicted RBP26.53■■□□□ 1.84
CBX3-204ENST00000456948 ESYT2A0FGR8 921 aa26.52■■□□□ 1.84
CBX3-204ENST00000456948 NOP56O00567 594 aaKnown RBP26.52■■□□□ 1.84
CBX3-204ENST00000456948 PSMC6P62333 389 aa26.52■■□□□ 1.84
CBX3-204ENST00000456948 PTPN11Q06124 597 aaPredicted RBP26.52■■□□□ 1.84
CBX3-204ENST00000456948 NTRK3Q16288 839 aa26.52■■□□□ 1.84
CBX3-204ENST00000456948 NFRKBQ6P4R8 1299 aa26.52■■□□□ 1.84
CBX3-204ENST00000456948 FAM126BQ8IXS8 530 aa26.52■■□□□ 1.84
CBX3-204ENST00000456948 GPRASP2Q96D09 838 aa26.52■■□□□ 1.84
CBX3-204ENST00000456948 NCOA5Q9HCD5 579 aaKnown RBP26.52■■□□□ 1.84
CBX3-204ENST00000456948 TRIM43BA6NCK2 446 aa26.51■■□□□ 1.83
CBX3-204ENST00000456948 STK3Q13188 491 aa26.51■■□□□ 1.83
CBX3-204ENST00000456948 FAM47CQ5HY64 1035 aa26.51■■□□□ 1.83
CBX3-204ENST00000456948 SH3RF1Q7Z6J0 888 aa26.51■■□□□ 1.83
CBX3-204ENST00000456948 TRIM43Q96BQ3 446 aaPredicted RBP26.51■■□□□ 1.83
CBX3-204ENST00000456948 IL17RAQ96F46 866 aa26.51■■□□□ 1.83
CBX3-204ENST00000456948 ZFP91Q96JP5 570 aaPredicted RBP26.51■■□□□ 1.83
CBX3-204ENST00000456948 SENP7Q9BQF6 1050 aa26.51■■□□□ 1.83
CBX3-204ENST00000456948 MYH7BA7E2Y1 1941 aa26.51■■□□□ 1.83
CBX3-204ENST00000456948 TIMP1P01033 207 aa26.5■■□□□ 1.83
CBX3-204ENST00000456948 UBA1P22314 1058 aaKnown RBP26.5■■□□□ 1.83
CBX3-204ENST00000456948 TYW1BQ6NUM6 668 aa26.5■■□□□ 1.83
CBX3-204ENST00000456948 TDHQ8IZJ6 230 aa26.5■■□□□ 1.83
CBX3-204ENST00000456948 BADQ92934 168 aa26.5■■□□□ 1.83
CBX3-204ENST00000456948 ZMYND12Q9H0C1 365 aa26.5■■□□□ 1.83
CBX3-204ENST00000456948 SH3GLB2Q9NR46 395 aa26.5■■□□□ 1.83
CBX3-204ENST00000456948 DEXIO95424 95 aa26.49■■□□□ 1.83
CBX3-204ENST00000456948 ZNF76P36508 570 aa26.49■■□□□ 1.83
CBX3-204ENST00000456948 NEK4P51957 841 aa26.49■■□□□ 1.83
CBX3-204ENST00000456948 CHMP4BP1P59074 171 aa26.49■■□□□ 1.83
CBX3-204ENST00000456948 NBPF20Q3BBV1 942 aa26.49■■□□□ 1.83
CBX3-204ENST00000456948 METTL7BQ6UX53 244 aa26.49■■□□□ 1.83
CBX3-204ENST00000456948 LARP6Q9BRS8 491 aaKnown RBP26.49■■□□□ 1.83
CBX3-204ENST00000456948 GRIN2DO15399 1336 aa26.48■■□□□ 1.83
CBX3-204ENST00000456948 CD4P01730 458 aa26.48■■□□□ 1.83
CBX3-204ENST00000456948 MTMR1Q13613 665 aa26.48■■□□□ 1.83
CBX3-204ENST00000456948 PKN1Q16512 942 aa26.48■■□□□ 1.83
CBX3-204ENST00000456948 FAM177A1Q8N128 213 aaPredicted RBP26.48■■□□□ 1.83
CBX3-204ENST00000456948 REXO1Q8N1G1 1221 aaKnown RBP26.48■■□□□ 1.83
CBX3-204ENST00000456948 ANO3Q9BYT9 981 aa26.48■■□□□ 1.83
CBX3-204ENST00000456948 UPF2Q9HAU5 1272 aaKnown RBP26.48■■□□□ 1.83
CBX3-204ENST00000456948 TBX21Q9UL17 535 aa26.48■■□□□ 1.83
CBX3-204ENST00000456948 NOD1Q9Y239 953 aa26.48■■□□□ 1.83
CBX3-204ENST00000456948 SEC24BO95487 1268 aa26.47■■□□□ 1.83
CBX3-204ENST00000456948 SP2Q02086 613 aa26.47■■□□□ 1.83
CBX3-204ENST00000456948 TMEM199Q8N511 208 aa26.47■■□□□ 1.83
CBX3-204ENST00000456948 JADE2Q9NQC1 790 aa26.47■■□□□ 1.83
CBX3-204ENST00000456948 SOX1O00570 391 aaPredicted RBP26.46■■□□□ 1.83
CBX3-204ENST00000456948 PFKFB2O60825 505 aa26.46■■□□□ 1.83
CBX3-204ENST00000456948 XBP1P17861 261 aa26.46■■□□□ 1.83
CBX3-204ENST00000456948 AK2P54819 239 aa26.46■■□□□ 1.83
CBX3-204ENST00000456948 NLRP5P59047 1200 aa26.46■■□□□ 1.83
CBX3-204ENST00000456948 FPGSQ05932 587 aa26.46■■□□□ 1.83
CBX3-204ENST00000456948 CYFIP1Q7L576 1253 aa26.46■■□□□ 1.83
CBX3-204ENST00000456948 C7orf31Q8N865 590 aa26.46■■□□□ 1.83
CBX3-204ENST00000456948 TRPV6Q9H1D0 765 aa26.46■■□□□ 1.83
CBX3-204ENST00000456948 UBIAD1Q9Y5Z9 338 aa26.46■■□□□ 1.83
CBX3-204ENST00000456948 SORBS3O60504 671 aa26.45■■□□□ 1.82
CBX3-204ENST00000456948 B4GALT4O60513 344 aa26.45■■□□□ 1.82
CBX3-204ENST00000456948 CLK2P49760 499 aaKnown RBP26.45■■□□□ 1.82
CBX3-204ENST00000456948 HSDL1Q3SXM5 330 aa26.45■■□□□ 1.82
CBX3-204ENST00000456948 JAKMIP3Q5VZ66 844 aa26.45■■□□□ 1.82
CBX3-204ENST00000456948 MFSD5Q6N075 450 aa26.45■■□□□ 1.82
CBX3-204ENST00000456948 LRCH3Q96II8 777 aa26.45■■□□□ 1.82
CBX3-204ENST00000456948 MXRA8Q9BRK3 442 aa26.45■■□□□ 1.82
CBX3-204ENST00000456948 HIPK3Q9H422 1215 aa26.45■■□□□ 1.82
CBX3-204ENST00000456948 TPCN1Q9ULQ1 816 aa26.45■■□□□ 1.82
CBX3-204ENST00000456948 SCN10AQ9Y5Y9 1956 aa26.44■■□□□ 1.82
CBX3-204ENST00000456948 PPFIA3O75145 1194 aa26.44■■□□□ 1.82
CBX3-204ENST00000456948 HOXD8P13378 290 aaPredicted RBP26.44■■□□□ 1.82
CBX3-204ENST00000456948 SREBF1P36956 1147 aa26.44■■□□□ 1.82
CBX3-204ENST00000456948 PSEN2P49810 448 aa26.44■■□□□ 1.82
CBX3-204ENST00000456948 PPIGQ13427 754 aaKnown RBP eCLIP26.44■■□□□ 1.821e-9■□□□□ 10.5
CBX3-204ENST00000456948 C8orf34Q49A92 452 aa26.44■■□□□ 1.82
CBX3-204ENST00000456948 CEP55Q53EZ4 464 aa26.44■■□□□ 1.82
CBX3-204ENST00000456948 GALNT17Q6IS24 598 aa26.44■■□□□ 1.82
CBX3-204ENST00000456948 C22orf23Q9BZE7 217 aa26.44■■□□□ 1.82
CBX3-204ENST00000456948 ITGB5P18084 799 aa26.43■■□□□ 1.82
CBX3-204ENST00000456948 SCRN1Q12765 414 aa26.43■■□□□ 1.82
CBX3-204ENST00000456948 MFSD10Q14728 455 aa26.43■■□□□ 1.82
CBX3-204ENST00000456948 SESTD1Q86VW0 696 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms