RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 XRRA1Q6P2D8 792 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 NLRX1Q86UT6 975 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 ZNF713Q8N859 430 aaPredicted RBP18.62■□□□□ 0.57
CPSF6-203ENST00000456847 INPP4AQ96PE3 977 aaPredicted RBP18.62■□□□□ 0.57
CPSF6-203ENST00000456847 NOC4LQ9BVI4 516 aaKnown RBP18.62■□□□□ 0.57
CPSF6-203ENST00000456847 KATNAL1Q9BW62 490 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 USP26Q9BXU7 913 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 FAM217BQ9NTX9 383 aaPredicted RBP18.62■□□□□ 0.57
CPSF6-203ENST00000456847 UMODL1Q5DID0 1318 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 CYP2C9P11712 490 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
CPSF6-203ENST00000456847 ADCY7P51828 1080 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 CCL23P55773 120 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 FUT2Q10981 343 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 MYSM1Q5VVJ2 828 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 RUFY3Q7L099 469 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 ALG1Q9BT22 464 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 CYP46A1Q9Y6A2 500 aa18.62■□□□□ 0.57
CPSF6-203ENST00000456847 SP2Q02086 613 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 GPR153Q6NV75 609 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 PCDHA6Q9UN73 950 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 PCDHA8Q9Y5H6 950 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 TANC1Q9C0D5 1861 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 STXBP3O00186 592 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 NOP56O00567 594 aaKnown RBP18.61■□□□□ 0.57
CPSF6-203ENST00000456847 ACRP10323 421 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 ICAM3P32942 547 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 PSEN2P49810 448 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 NEDD9Q14511 834 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 HSDL1Q3SXM5 330 aa18.61■□□□□ 0.57
CPSF6-203ENST00000456847 PSRC1Q6PGN9 363 aaPredicted RBP18.61■□□□□ 0.57
CPSF6-203ENST00000456847 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.61■□□□□ 0.577e-7■□□□□ 9.9
CPSF6-203ENST00000456847 NID2Q14112 1375 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 AKAP17AQ02040 695 aaKnown RBP18.6■□□□□ 0.57
CPSF6-203ENST00000456847 MFSD10Q14728 455 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 FBXL16Q8N461 479 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 C7orf31Q8N865 590 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 KAT2BQ92831 832 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 AGXT2Q9BYV1 514 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 ZSWIM6Q9HCJ5 1215 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 IL23AQ9NPF7 189 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 RIC8AQ9NPQ8 531 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 BARHL2Q9NY43 387 aa18.6■□□□□ 0.57
CPSF6-203ENST00000456847 SPATA31C2B4DYI2 1134 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 F2P00734 622 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 SEMA3FQ13275 785 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 PTGISQ16647 500 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 TYW1BQ6NUM6 668 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 DEFB123Q8N688 67 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 WNT8AQ9H1J5 351 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 SMCO2A6NFE2 343 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 SCG2P13521 617 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 PFKFB3Q16875 520 aaPredicted RBP18.59■□□□□ 0.57
CPSF6-203ENST00000456847 KIAA0753Q2KHM9 967 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 Q7L0L9 218 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 CYFIP1Q7L576 1253 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 SCLYQ96I15 445 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 PGBD1Q96JS3 809 aa18.59■□□□□ 0.57
CPSF6-203ENST00000456847 UPF3BQ9BZI7 483 aaKnown RBP18.59■□□□□ 0.57
CPSF6-203ENST00000456847 PPFIA4O75335 1185 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 CCT2P78371 535 aaKnown RBP18.58■□□□□ 0.56
CPSF6-203ENST00000456847 SP4Q02446 784 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 SCN5AQ14524 2016 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 TMEM240Q5SV17 173 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 GDF6Q6KF10 455 aaPredicted RBP18.58■□□□□ 0.56
CPSF6-203ENST00000456847 METTL7BQ6UX53 244 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 ZNF365Q70YC5 407 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 SESTD1Q86VW0 696 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 CCDC155Q8N6L0 562 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 RETREG2Q8NC44 543 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 GPRASP2Q96D09 838 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 CDHR1Q96JP9 859 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 TM6SF1Q9BZW5 370 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 GLT8D2Q9H1C3 349 aa18.58■□□□□ 0.56
CPSF6-203ENST00000456847 HOXD8P13378 290 aaPredicted RBP18.57■□□□□ 0.56
CPSF6-203ENST00000456847 BFSP2Q13515 415 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 PHKBQ93100 1093 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 ANO3Q9BYT9 981 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 BCAS3Q9H6U6 928 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 HDAC6Q9UBN7 1215 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 FOSP01100 380 aaPredicted RBP18.57■□□□□ 0.56
CPSF6-203ENST00000456847 PDIA3P30101 505 aaKnown RBP18.57■□□□□ 0.56
CPSF6-203ENST00000456847 SMAD3P84022 425 aaKnown RBP18.57■□□□□ 0.56
CPSF6-203ENST00000456847 MTMR1Q13613 665 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 TOB2Q14106 344 aaPredicted RBP18.57■□□□□ 0.56
CPSF6-203ENST00000456847 ZNF697Q5TEC3 545 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 RPUSD2Q8IZ73 545 aaKnown RBP18.57■□□□□ 0.56
CPSF6-203ENST00000456847 GIMAP8Q8ND71 665 aaPredicted RBP18.57■□□□□ 0.56
CPSF6-203ENST00000456847 CCDC12Q8WUD4 166 aaPredicted RBP18.57■□□□□ 0.56
CPSF6-203ENST00000456847 SLC26A6Q9BXS9 759 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 MTIF3Q9H2K0 278 aaKnown RBP18.57■□□□□ 0.56
CPSF6-203ENST00000456847 PKD2L1Q9P0L9 805 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 GTF2IRD1Q9UHL9 959 aa18.57■□□□□ 0.56
CPSF6-203ENST00000456847 LGALS2P05162 132 aa18.56■□□□□ 0.56
CPSF6-203ENST00000456847 C16orf59Q7L2K0 433 aa18.56■□□□□ 0.56
CPSF6-203ENST00000456847 TEX2Q8IWB9 1127 aa18.56■□□□□ 0.56
CPSF6-203ENST00000456847 NCOA5Q9HCD5 579 aaKnown RBP18.56■□□□□ 0.56
CPSF6-203ENST00000456847 PDRG1Q9NUG6 133 aa18.56■□□□□ 0.56
CPSF6-203ENST00000456847 TMEM260Q9NX78 707 aa18.56■□□□□ 0.56
CPSF6-203ENST00000456847 UBIAD1Q9Y5Z9 338 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms