RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
TIMP1-205ENST00000456754 MRVI1Q9Y6F6 885 aa16.02■□□□□ 0.16
TIMP1-205ENST00000456754 B4DLN1 442 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 SPATA31C2B4DYI2 1134 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 DYNC1LI2O43237 492 aaPredicted RBP16.01■□□□□ 0.15
TIMP1-205ENST00000456754 SLC37A4O43826 429 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 SGPL1O95470 568 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 GJB1P08034 283 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 ZNF76P36508 570 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 MNX1P50219 401 aaPredicted RBP16.01■□□□□ 0.15
TIMP1-205ENST00000456754 SAFBQ15424 915 aaKnown RBP eCLIP16.01■□□□□ 0.15
TIMP1-205ENST00000456754 LETM2Q2VYF4 491 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 DUSP28Q4G0W2 176 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 CEP55Q53EZ4 464 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 PRR16Q569H4 304 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 IQSEC1Q6DN90 963 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 DIS3LQ8TF46 1054 aaKnown RBP16.01■□□□□ 0.15
TIMP1-205ENST00000456754 SCFD2Q8WU76 684 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 MTMR6Q9Y217 621 aa16.01■□□□□ 0.15
TIMP1-205ENST00000456754 MEIS1O00470 390 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 ADAMTS4O75173 837 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 RARBP10826 455 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 U2AF2P26368 475 aaKnown RBP eCLIP16■□□□□ 0.15
TIMP1-205ENST00000456754 ICAM3P32942 547 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 CIITAP33076 1130 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 GJA8P48165 433 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 TOB1P50616 345 aaPredicted RBP16■□□□□ 0.15
TIMP1-205ENST00000456754 ARHGAP1Q07960 439 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 ITGB3BPQ13352 177 aaPredicted RBP16■□□□□ 0.15
TIMP1-205ENST00000456754 MTMR1Q13613 665 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 TTLL4Q14679 1199 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 XRRA1Q6P2D8 792 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 FAM173BQ6P4H8 233 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 NEK8Q86SG6 692 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 TLK2Q86UE8 772 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 PLA2G4DQ86XP0 818 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 TEX2Q8IWB9 1127 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 TMEM106CQ9BVX2 250 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 CRISPLD2Q9H0B8 497 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 FOXP1Q9H334 677 aaPredicted RBP16■□□□□ 0.15
TIMP1-205ENST00000456754 XPNPEP3Q9NQH7 507 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 KCNH7Q9NS40 1196 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 KIF3AQ9Y496 699 aa16■□□□□ 0.15
TIMP1-205ENST00000456754 DDX39AO00148 427 aaKnown RBP15.99■□□□□ 0.15
TIMP1-205ENST00000456754 FIBPO43427 364 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 DUSP11O75319 330 aaKnown RBP15.99■□□□□ 0.15
TIMP1-205ENST00000456754 GGPS1O95749 300 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 TFRCP02786 760 aaKnown RBP15.99■□□□□ 0.15
TIMP1-205ENST00000456754 KCNA2P16389 499 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 SP4Q02446 784 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 GNL2Q13823 731 aaKnown RBP15.99■□□□□ 0.15
TIMP1-205ENST00000456754 BECN1Q14457 450 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 LRRC41Q15345 812 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 MCTP2Q6DN12 878 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 NLRX1Q86UT6 975 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 OR6J1Q8NGC5 347 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 PPP1R13LQ8WUF5 828 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 GPRASP2Q96D09 838 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 AGO4Q9HCK5 861 aaKnown RBP15.99■□□□□ 0.15
TIMP1-205ENST00000456754 OGDHLQ9ULD0 1010 aa15.99■□□□□ 0.15
TIMP1-205ENST00000456754 RBM19Q9Y4C8 960 aaKnown RBP15.99■□□□□ 0.15
TIMP1-205ENST00000456754 MSH4O15457 936 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 STX6O43752 255 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 CCNT1O60563 726 aaKnown RBP15.98■□□□□ 0.15
TIMP1-205ENST00000456754 CAPN15O75808 1086 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 STAM2O75886 525 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 C6orf222P0C671 652 aaPredicted RBP15.98■□□□□ 0.15
TIMP1-205ENST00000456754 USP11P51784 963 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 RESTQ13127 1097 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 GNPTABQ3T906 1256 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 CYFIP1Q7L576 1253 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 AFG1LQ8WV93 481 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 MBOAT7Q96N66 472 aa15.98■□□□□ 0.15
TIMP1-205ENST00000456754 UPF3AQ9H1J1 476 aaKnown RBP15.98■□□□□ 0.15
TIMP1-205ENST00000456754 DDX25Q9UHL0 483 aaKnown RBP15.98■□□□□ 0.15
TIMP1-205ENST00000456754 CYP3A7-CYP3A51PA0A087WV96 503 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 FARP2O94887 1054 aaPredicted RBP15.97■□□□□ 0.15
TIMP1-205ENST00000456754 GH1P01241 217 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 CYP3A7P24462 503 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 GJA9P57773 515 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 ZNF174Q15697 407 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 HSDL1Q3SXM5 330 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 CELF3Q5SZQ8 465 aaKnown RBP15.97■□□□□ 0.15
TIMP1-205ENST00000456754 MYSM1Q5VVJ2 828 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 KLHDC9Q8NEP7 349 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 CHAMP1Q96JM3 812 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
TIMP1-205ENST00000456754 MYH15Q9Y2K3 1946 aa15.96■□□□□ 0.15
TIMP1-205ENST00000456754 DHX15O43143 795 aaKnown RBP15.96■□□□□ 0.15
TIMP1-205ENST00000456754 MSCO60682 206 aa15.96■□□□□ 0.15
TIMP1-205ENST00000456754 MCM7P33993 719 aa15.96■□□□□ 0.15
TIMP1-205ENST00000456754 FSCN1Q16658 493 aaKnown RBP15.96■□□□□ 0.15
TIMP1-205ENST00000456754 Q4G0T1 1027 aa15.96■□□□□ 0.15
TIMP1-205ENST00000456754 CCSAPQ6IQ19 270 aaPredicted RBP15.96■□□□□ 0.15
TIMP1-205ENST00000456754 NIPA1Q7RTP0 329 aa15.96■□□□□ 0.15
TIMP1-205ENST00000456754 DHX37Q8IY37 1157 aaKnown RBP15.96■□□□□ 0.15
TIMP1-205ENST00000456754 HAS1Q92839 578 aa15.96■□□□□ 0.15
TIMP1-205ENST00000456754 FERMT2Q96AC1 680 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms