RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 ST13P5Q8NFI4 369 aaPredicted RBP5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 PLEKHO2Q8TD55 490 aa5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 ALG3Q92685 438 aa5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 DPF3Q92784 378 aa5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 RXFP1Q9HBX9 757 aa5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 A0A1W2PQU0 124 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 C22orf46C9J442 243 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 SMARCA5O60264 1052 aaPredicted RBP5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 NTRK1P04629 796 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 CAPNS1P04632 268 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 FBLN1P23142 703 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 LTBRP36941 435 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 HSP90AA2PQ14568 343 aaPredicted RBP5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 TESK1Q15569 626 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 PRSS53Q2L4Q9 553 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 BORAQ6PGQ7 559 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 B3GNT8Q7Z7M8 397 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 DCP2Q8IU60 420 aaKnown RBP5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 CCDC103Q8IW40 242 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 TEX2Q8IWB9 1127 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 TMEM145Q8NBT3 493 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 KCTD13Q8WZ19 329 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 CDK5RAP1Q96SZ6 601 aaKnown RBP5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 AP5M1Q9H0R1 490 aa5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 TMEFF2Q9UIK5 374 aaPredicted RBP5.73□□□□□ -1.49
R3HDM1-212ENST00000456040 GRIA2P42262 883 aa5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 MAP4K2Q12851 820 aa5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 SLC35F1Q5T1Q4 408 aa5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 MROH9Q5TGP6 573 aa5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 NBPF6Q5VWK0 638 aa5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 CEP68Q76N32 757 aa5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 LGI4Q8N135 537 aa5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 RCBTB1Q8NDN9 531 aa5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 TRMT2BQ96GJ1 504 aaKnown RBP5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 NBPF4Q96M43 638 aa5.72□□□□□ -1.49
R3HDM1-212ENST00000456040 ARNTLO00327 626 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 ASGR2P07307 311 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 BCL6P41182 706 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 LSAMPQ13449 338 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 TBC1D10BQ4KMP7 808 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 CRB2Q5IJ48 1285 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 DENND5AQ6IQ26 1287 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 ZNF761Q86XN6 746 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 RIOX2Q8IUF8 465 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 LRRC47Q8N1G4 583 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 ZNF669Q96BR6 464 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 ARMC5Q96C12 935 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 C1orf159Q96HA4 380 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 TMEM169Q96HH4 297 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 CHAMP1Q96JM3 812 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 AARSD1Q9BTE6 412 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 IER2Q9BTL4 223 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 HIRIP3Q9BW71 556 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 PLA2G2DQ9UNK4 145 aa5.71□□□□□ -1.5
R3HDM1-212ENST00000456040 H7BY64 318 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 SLPIP03973 132 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 FPR2P25090 351 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 PMLP29590 882 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 GTF2F1P35269 517 aaKnown RBP eCLIP5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 ACVRL1P37023 503 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 SLC6A11P48066 632 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 Q8N1Y9 231 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 CPA5Q8WXQ8 436 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 SEC14L1Q92503 715 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 BCAS3Q9H6U6 928 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 COA3Q9Y2R0 106 aaPredicted RBP5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 MSRB2Q9Y3D2 182 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 SIT1Q9Y3P8 196 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 PCDHA2Q9Y5H9 948 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 X6R8D5 127 aa5.7□□□□□ -1.5
R3HDM1-212ENST00000456040 TRAV20A0A0B4J274 112 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 PDPK1O15530 556 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 DLX3O60479 287 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 FGFR1P11362 822 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 LCP1P13796 627 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 SPRED1Q7Z699 444 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 NLRP10Q86W26 655 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 CCDC113Q9H0I3 377 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 VPS11Q9H270 941 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 ARHGEF4Q9NR80 690 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 SIRPGQ9P1W8 387 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 TSC22D4Q9Y3Q8 395 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 NPFFR2Q9Y5X5 522 aa5.69□□□□□ -1.5
R3HDM1-212ENST00000456040 SGSM2O43147 1006 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 PRODHO43272 600 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 MC3RP41968 323 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 DLX2Q07687 328 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 CACNB2Q08289 660 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 RASGRF1Q13972 1273 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 SURF1Q15526 300 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 CRIP3Q6Q6R5 217 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 RSPO2Q6UXX9 243 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 NSMFQ6X4W1 530 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 USP53Q70EK8 1073 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 ADAMTS17Q8TE56 1095 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 ZBTB8AQ96BR9 441 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 PCDH18Q9HCL0 1135 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 GPR27Q9NS67 375 aa5.68□□□□□ -1.5
R3HDM1-212ENST00000456040 CLDND1Q9NY35 253 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms