RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ZBED3Q96IU2 234 aaPredicted RBP11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 ERGIC2Q96RQ1 377 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 EIF3CQ99613 913 aaKnown RBP11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 FUT8Q9BYC5 575 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 GLT8D2Q9H1C3 349 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 R3HDMLQ9H3Y0 253 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 MYO6Q9UM54 1294 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 HTTP42858 3142 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 FLT1P17948 1338 aa11.79□□□□□ -0.52
GTF3C2-206ENST00000454704 TARSL2A2RTX5 802 aaKnown RBP11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 KLRF2D3W0D1 207 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 SMIM22K7EJ46 135 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 IL1R1P14778 569 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 CASP1P29466 404 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 ARHGAP25P42331 645 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 MMP14P50281 582 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 NAPAP54920 295 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 PDIA5Q14554 519 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 SMC1AQ14683 1233 aaKnown RBP11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 LONRF2Q1L5Z9 754 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 NOM1Q5C9Z4 860 aaKnown RBP11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 HEATR3Q7Z4Q2 680 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 IRF2BP1Q8IU81 584 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 ZSCAN29Q8IWY8 852 aaPredicted RBP11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 CERS5Q8N5B7 392 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 SH3RF3Q8TEJ3 882 aaPredicted RBP11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 EXOC4Q96A65 974 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 TRIM9Q9C026 710 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 VIPAS39Q9H9C1 493 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 GDAQ9Y2T3 454 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 MYH7BA7E2Y1 1941 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 GAKO14976 1311 aa11.78□□□□□ -0.52
GTF3C2-206ENST00000454704 F8W031 263 aaPredicted RBP11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 FKTNO75072 461 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 HNRNPH3P31942 346 aaKnown RBP11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 AMPD2Q01433 879 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 LRRC63Q05C16 580 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 ITIH3Q06033 890 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 INF2Q27J81 1249 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 PRPF38BQ5VTL8 546 aaKnown RBP11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 PAPD7Q5XG87 772 aaKnown RBP11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 MCTP2Q6DN12 878 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 CCDC84Q86UT8 332 aaPredicted RBP11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 CSGALNACT2Q8N6G5 542 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 GPKOWQ92917 476 aaPredicted RBP eCLIP11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 TUBGCP2Q9BSJ2 902 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 TTYH3Q9C0H2 523 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 RIOX1Q9H6W3 641 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 CD209Q9NNX6 404 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 PCDHAC2Q9Y5I4 1007 aa11.77□□□□□ -0.52
GTF3C2-206ENST00000454704 TTC26A0AVF1 554 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 CYTH3O43739 400 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 OAS2P29728 719 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 CDK8P49336 464 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 PDE4DQ08499 809 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 DLGAP5Q15398 846 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 PTPN21Q16825 1174 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 FBXO46Q6PJ61 603 aaPredicted RBP11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 UNC13DQ70J99 1090 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 SV2BQ7L1I2 683 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 TRAPPC11Q7Z392 1133 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 REXO1Q8N1G1 1221 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 GUF1Q8N442 669 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 CCDC155Q8N6L0 562 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 ACRBPQ8NEB7 543 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 STAMQ92783 540 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 CLMNQ96JQ2 1002 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 CFHR5Q9BXR6 569 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 NUCKS1Q9H1E3 243 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 TMEM60Q9H2L4 133 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 ANKZF1Q9H8Y5 726 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 MED4Q9NPJ6 270 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 RIC8AQ9NPQ8 531 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 ZHX1Q9UKY1 873 aaPredicted RBP11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 JAG2Q9Y219 1238 aa11.77□□□□□ -0.53
GTF3C2-206ENST00000454704 MYH4Q9Y623 1939 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 CENPFP49454 3210 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 CLRN2A0PK11 232 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 SMCO2A6NFE2 343 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 USO1O60763 962 aaKnown RBP11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 GCFC2P16383 781 aaKnown RBP11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 PRLRP16471 622 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 PLCG1P19174 1290 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 BTDP43251 543 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 TBC1D8BQ0IIM8 1120 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 MUM1L1Q5H9M0 696 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 BEND6Q5SZJ8 279 aaPredicted RBP11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 CENPPQ6IPU0 288 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 CCDC70Q6NSX1 233 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 TYW1BQ6NUM6 668 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 TEX11Q8IYF3 940 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 TGFBRAP1Q8WUH2 860 aa11.76□□□□□ -0.53
GTF3C2-206ENST00000454704 CNOT6LQ96LI5 555 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms