RNA–Protein interactions for RNA: ENST00000454635.6

LINC00963-207, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 910 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-207ENST00000454635 CAGE1Q8TC20 777 aa12.16□□□□□ -0.46
LINC00963-207ENST00000454635 COPS5Q92905 334 aa12.16□□□□□ -0.46
LINC00963-207ENST00000454635 SPATA33Q96N06 139 aa12.16□□□□□ -0.46
LINC00963-207ENST00000454635 INPP4AQ96PE3 977 aaPredicted RBP12.16□□□□□ -0.46
LINC00963-207ENST00000454635 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
LINC00963-207ENST00000454635 PPP1R12CQ9BZL4 782 aa12.16□□□□□ -0.46
LINC00963-207ENST00000454635 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
LINC00963-207ENST00000454635 SNX14Q9Y5W7 946 aa12.16□□□□□ -0.46
LINC00963-207ENST00000454635 COL6A3P12111 3177 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 GGPS1O95749 300 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 F2P00734 622 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 ACTN1P12814 892 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 ICAM3P32942 547 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 ADCY7P51828 1080 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 AP3B2Q13367 1082 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 SLC35G1Q2M3R5 365 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 CELF3Q5SZQ8 465 aaKnown RBP12.15□□□□□ -0.46
LINC00963-207ENST00000454635 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 Q6ZUG5 572 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 CCDC82Q8N4S0 544 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 DEFB123Q8N688 67 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 RETREG2Q8NC44 543 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 GPRASP2Q96D09 838 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 LRCH3Q96II8 777 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 SENP7Q9BQF6 1050 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 IL23AQ9NPF7 189 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 CYP46A1Q9Y6A2 500 aa12.15□□□□□ -0.46
LINC00963-207ENST00000454635 GRIN2DO15399 1336 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 MYO9BQ13459 2157 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.14□□□□□ -0.47
LINC00963-207ENST00000454635 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.14□□□□□ -0.47
LINC00963-207ENST00000454635 SOX1O00570 391 aaPredicted RBP12.14□□□□□ -0.47
LINC00963-207ENST00000454635 MEIS2O14770 477 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 HOXD8P13378 290 aaPredicted RBP12.14□□□□□ -0.47
LINC00963-207ENST00000454635 UBA1P22314 1058 aaKnown RBP12.14□□□□□ -0.47
LINC00963-207ENST00000454635 ITGB8P26012 769 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 CPLX2Q6PUV4 134 aaKnown RBP12.14□□□□□ -0.47
LINC00963-207ENST00000454635 USP17L6PQ6QN14 398 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 CMTR1Q8N1G2 835 aaKnown RBP12.14□□□□□ -0.47
LINC00963-207ENST00000454635 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 TNPO1Q92973 898 aaKnown RBP12.14□□□□□ -0.47
LINC00963-207ENST00000454635 BRF1Q92994 677 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 TCEANC2Q96MN5 208 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 NOC4LQ9BVI4 516 aaKnown RBP12.14□□□□□ -0.47
LINC00963-207ENST00000454635 TM6SF1Q9BZW5 370 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 BARHL2Q9NY43 387 aa12.14□□□□□ -0.47
LINC00963-207ENST00000454635 PTPRSQ13332 1948 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 RGS20O76081 388 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 GNAT1P11488 350 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 CSF2RAP15509 400 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 GNA11P29992 359 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 CYP2C18P33260 490 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 CHMP4BP1P59074 171 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 MTMR1Q13613 665 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 MFSD10Q14728 455 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 PTGISQ16647 500 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 KIAA0753Q2KHM9 967 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 C9orf50Q5SZB4 431 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 TRIM22Q8IYM9 498 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 IL31RAQ8NI17 732 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 BICD2Q8TD16 824 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 IL17RAQ96F46 866 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 AGXT2Q9BYV1 514 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 TRPV6Q9H1D0 765 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 TRMT13Q9NUP7 481 aaKnown RBP12.13□□□□□ -0.47
LINC00963-207ENST00000454635 GTF2IRD1Q9UHL9 959 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 TET1Q8NFU7 2136 aa12.13□□□□□ -0.47
LINC00963-207ENST00000454635 CDH23Q9H251 3354 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 EVPLQ92817 2033 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 ESYT2A0FGR8 921 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 FGBP02675 491 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 SCG2P13521 617 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 PTGS1P23219 599 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 PSEN2P49810 448 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 MRPS9P82933 396 aaKnown RBP12.12□□□□□ -0.47
LINC00963-207ENST00000454635 APOBRQ0VD83 1088 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 PFKFB3Q16875 520 aaPredicted RBP12.12□□□□□ -0.47
LINC00963-207ENST00000454635 HSDL1Q3SXM5 330 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 WWC2Q6AWC2 1192 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 FAM177A1Q8N128 213 aaPredicted RBP12.12□□□□□ -0.47
LINC00963-207ENST00000454635 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
LINC00963-207ENST00000454635 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
LINC00963-207ENST00000454635 RNF26Q9BY78 433 aaPredicted RBP12.12□□□□□ -0.47
LINC00963-207ENST00000454635 C6orf50Q9HD87 102 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
LINC00963-207ENST00000454635 NLRC5Q86WI3 1866 aa12.12□□□□□ -0.47
LINC00963-207ENST00000454635 SIP14410 1827 aa12.11□□□□□ -0.47
LINC00963-207ENST00000454635 SMCO2A6NFE2 343 aa12.11□□□□□ -0.47
LINC00963-207ENST00000454635 H3BRB1 525 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms