RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 RCAN1P53805 252 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 MRPS9P82933 396 aaKnown RBP12.28□□□□□ -0.44
DDX39A-203ENST00000454233 BFSP2Q13515 415 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 NEDD9Q14511 834 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 MFSD10Q14728 455 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 PTGISQ16647 500 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 PCNX4Q63HM2 1172 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 NLRX1Q86UT6 975 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 SESTD1Q86VW0 696 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 CCDC155Q8N6L0 562 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 C7orf31Q8N865 590 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 KAT2BQ92831 832 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 SCLYQ96I15 445 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 FAM161BQ96MY7 647 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 INPP4AQ96PE3 977 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-203ENST00000454233 ALG1Q9BT22 464 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 WNT8AQ9H1J5 351 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 EHMT1Q9H9B1 1298 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 RTEL1Q9NZ71 1219 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 SNX14Q9Y5W7 946 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 CNTNAP5Q8WYK1 1306 aa12.28□□□□□ -0.44
DDX39A-203ENST00000454233 MYH7BA7E2Y1 1941 aa12.27□□□□□ -0.44
DDX39A-203ENST00000454233 TMEM265A0A087WTH1 108 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 CCDC196A0A1B0GTZ2 297 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 SPDYE3A6NKU9 549 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 SPATA31C2B4DYI2 1134 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 hCG_1984214I3L0E3 225 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 NOP56O00567 594 aaKnown RBP12.27□□□□□ -0.45
DDX39A-203ENST00000454233 EPB41L2O43491 1005 aaKnown RBP12.27□□□□□ -0.45
DDX39A-203ENST00000454233 F2P00734 622 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 PFKMP08237 780 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 ZNF286BP0CG31 522 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 HOXD8P13378 290 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-203ENST00000454233 CPA1P15085 419 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 NAPAP54920 295 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 SP2Q02086 613 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 KIAA0753Q2KHM9 967 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 HSDL1Q3SXM5 330 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 ERICH6BQ5W0A0 696 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 Q6ZUG5 572 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 ZNF713Q8N859 430 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-203ENST00000454233 HERVK_113Q902F9 699 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 GPKOWQ92917 476 aaPredicted RBP eCLIP12.27□□□□□ -0.458e-6■■□□□ 13.6
DDX39A-203ENST00000454233 STXBP5LQ9Y2K9 1186 aa12.27□□□□□ -0.45
DDX39A-203ENST00000454233 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-203ENST00000454233 RFC2P35250 354 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 METAP2P50579 478 aaKnown RBP eCLIP12.26□□□□□ -0.45
DDX39A-203ENST00000454233 APOBRQ0VD83 1088 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 UBE2SQ16763 222 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 RASIP1Q5U651 963 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 WWC2Q6AWC2 1192 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 GDF6Q6KF10 455 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-203ENST00000454233 PPP1R18Q6NYC8 613 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 METTL7BQ6UX53 244 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 OTOP2Q7RTS6 562 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 TEX2Q8IWB9 1127 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 GIMAP8Q8ND71 665 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-203ENST00000454233 CAGE1Q8TC20 777 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 BRF1Q92994 677 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 CDHR1Q96JP9 859 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 SEMA6BQ9H3T3 888 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 HDAC6Q9UBN7 1215 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 GTF2IRD1Q9UHL9 959 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 PCDHA6Q9UN73 950 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 PCDHA8Q9Y5H6 950 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 LAMA3Q16787 3333 aa12.26□□□□□ -0.45
DDX39A-203ENST00000454233 ZBBXA8MT70 800 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 HAS3O00219 553 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 CENPBP07199 599 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-203ENST00000454233 IQCF3P0C7M6 154 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 ACTN1P12814 892 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 RPS6KB1P23443 525 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 DNAJB2P25686 324 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 CDC27P30260 824 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 ADCY7P51828 1080 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 FUT2Q10981 343 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 CYFIP1Q7L576 1253 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 DEFB128Q7Z7B8 93 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 GPRASP2Q96D09 838 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 GUCD1Q96NT3 240 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 SENP7Q9BQF6 1050 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 RIC8AQ9NPQ8 531 aa12.25□□□□□ -0.45
DDX39A-203ENST00000454233 H3BRB1 525 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 FOSP01100 380 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-203ENST00000454233 LGALS2P05162 132 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 ADD1P35611 737 aaKnown RBP12.24□□□□□ -0.45
DDX39A-203ENST00000454233 PTK7Q13308 1070 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 RAB30Q15771 203 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 SZT2Q5T011 3432 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 FBXL16Q8N461 479 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 AFAP1L1Q8TED9 768 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 TIFAQ96CG3 184 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 C16orf70Q9BSU1 422 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 USP26Q9BXU7 913 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 FTOQ9C0B1 505 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX39A-203ENST00000454233 TTYH1Q9H313 450 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms