RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 TMEM260Q9NX78 707 aa15.21■□□□□ 0.02
UBE2D3-210ENST00000453744 HIBADHP31937 336 aaKnown RBP15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 MARCH10Q8NA82 808 aaPredicted RBP15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 COA7Q96BR5 231 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 PCDHA6Q9UN73 950 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 PCDHA8Q9Y5H6 950 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 RCAN1P53805 252 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 MECOMQ03112 1051 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 MEA1Q16626 185 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 NAALADL2Q58DX5 795 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 CADPS2Q86UW7 1296 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 ZNF512BQ96KM6 892 aaPredicted RBP15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 CETN3O15182 167 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 NKRFO15226 690 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 ADAM9Q13443 819 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 MICAL1Q8TDZ2 1067 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 DCP1AQ9NPI6 582 aaPredicted RBP15.2■□□□□ 0.02
UBE2D3-210ENST00000453744 SCP2P22307 547 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 PLTPP55058 493 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 ADCY1Q08828 1119 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 PDXDC1Q6P996 788 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 DDX12PQ92771 950 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 TAF1DQ9H5J8 278 aaPredicted RBP15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 PCDHB13Q9Y5F0 798 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 GOLGA6L10A0A0M3HER8 536 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 GLE1Q53GS7 698 aaKnown RBP15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 PARP9Q8IXQ6 854 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 VGLL2Q8N8G2 317 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 CCDC63Q8NA47 563 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 PANK4Q9NVE7 773 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 SALL4Q9UJQ4 1053 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 COL4A3BPQ9Y5P4 624 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 SERPING1P05155 500 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 FKBP3Q00688 224 aaKnown RBP15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 PICALMQ13492 652 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 KLHDC7AQ5VTJ3 777 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 KCNV1Q6PIU1 500 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 PIGSQ96S52 555 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 CEP83Q9Y592 693 aa15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 SETD1AO15047 1707 aaKnown RBP15.19■□□□□ 0.02
UBE2D3-210ENST00000453744 NALCNQ8IZF0 1738 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 MYMKA6NI61 221 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 KIF4AO95239 1232 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 ANKRD42Q8N9B4 389 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 ERGIC2Q96RQ1 377 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 ELAC2Q9BQ52 826 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 SART1O43290 800 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 FAM107AO95990 144 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 ELF1P32519 619 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 CCDC65Q8IXS2 484 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 HVCN1Q96D96 273 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 THOC1Q96FV9 657 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 CELF4Q9BZC1 486 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 CCSER1Q9C0I3 900 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 A0A087X0T9 212 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 PGRMC1O00264 195 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 RGS16O15492 202 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 BAG3O95817 575 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 FAM228BP0C875 321 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 DIXDC1Q155Q3 683 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 KDM7AQ6ZMT4 941 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 CCDC197Q8NCU1 140 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 LMBR1Q8WVP7 490 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 CTNNBL1Q8WYA6 563 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 RIC1Q4ADV7 1423 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 CRYBG1Q9Y4K1 1723 aa15.18■□□□□ 0.02
UBE2D3-210ENST00000453744 SHOX2O60902 331 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 MYL1P05976 194 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 KCNQ4P56696 695 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 LRRC27Q9C0I9 530 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 MLXIPLQ9NP71 852 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 KBTBD4Q9NVX7 518 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 BTG4Q9NY30 223 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 ARPP21Q9UBL0 812 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 RNF14Q9UBS8 474 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 ZNF652Q9Y2D9 606 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 ADAMTS2O95450 1211 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 LDHBP07195 334 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 ACTN1P12814 892 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 COPB2P35606 906 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 HSD17B3P37058 310 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 PPP2R2AP63151 447 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 MYO1EQ12965 1108 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 MTMR3Q13615 1198 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 MTA3Q9BTC8 594 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 CUEDC2Q9H467 287 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 SPDYE3A6NKU9 549 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 KLRC4O43908 158 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 FGFR2P21802 821 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 MKRN4PQ13434 485 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 PLS1Q14651 629 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 ALKBH5Q6P6C2 394 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 GPBP1Q86WP2 473 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 GLIS3Q8NEA6 775 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 IQCDQ96DY2 449 aa15.17■□□□□ 0.02
UBE2D3-210ENST00000453744 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms