RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 IGHA2P01877 340 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 PGK2P07205 417 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 GGCXP38435 758 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 AP3B2Q13367 1082 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 PKN1Q16512 942 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 XRRA1Q6P2D8 792 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 CCDC83Q8IWF9 413 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 NECAB1Q8N987 351 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 NSUN7Q8NE18 718 aaKnown RBP9.99□□□□□ -0.81
COL28A1-205ENST00000453441 SMARCC2Q8TAQ2 1214 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 MORC4Q8TE76 937 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 TMX3Q96JJ7 454 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 ZMYND12Q9H0C1 365 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 ORC3Q9UBD5 711 aaPredicted RBP9.99□□□□□ -0.81
COL28A1-205ENST00000453441 CNPY2Q9Y2B0 182 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 SMCO2A6NFE2 343 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 SPDYE3A6NKU9 549 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 MSCO60682 206 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 STAM2O75886 525 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 CTDNEP1O95476 244 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 ALDH5A1P51649 535 aaPredicted RBP9.98□□□□□ -0.81
COL28A1-205ENST00000453441 USP46P62068 366 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 TRIM29Q14134 588 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 PUS10Q3MIT2 529 aaKnown RBP9.98□□□□□ -0.81
COL28A1-205ENST00000453441 MAP3K21Q5TCX8 1036 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 SLC30A10Q6XR72 485 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 HSCBQ8IWL3 235 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 FAM184AQ8NB25 1140 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 DAGLBQ8NCG7 672 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 NPLOC4Q8TAT6 608 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 TRIB2Q92519 343 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 GPKOWQ92917 476 aaPredicted RBP eCLIP9.98□□□□□ -0.81
COL28A1-205ENST00000453441 INTS4Q96HW7 963 aaKnown RBP9.98□□□□□ -0.81
COL28A1-205ENST00000453441 REPIN1Q9BWE0 567 aaKnown RBP9.98□□□□□ -0.81
COL28A1-205ENST00000453441 ABHD16BQ9H3Z7 469 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 BRMS1Q9HCU9 246 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 VTA1Q9NP79 307 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 BIN2Q9UBW5 565 aaPredicted RBP9.98□□□□□ -0.81
COL28A1-205ENST00000453441 FRMPD4Q14CM0 1322 aa9.98□□□□□ -0.81
COL28A1-205ENST00000453441 hCG_1642624A0A1W2PR95 340 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 K7ELQ4 463 aaPredicted RBP9.97□□□□□ -0.81
COL28A1-205ENST00000453441 MEIS2O14770 477 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 INHAP05111 366 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 EDNRBP24530 442 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
COL28A1-205ENST00000453441 NLRP5P59047 1200 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 PDE4DQ08499 809 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 CUL4AQ13619 759 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 ARHGEF16Q5VV41 709 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 REXO1Q8N1G1 1221 aaKnown RBP9.97□□□□□ -0.81
COL28A1-205ENST00000453441 ZNF333Q96JL9 665 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 FGD4Q96M96 766 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 RMDN3Q96TC7 470 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 ALG1Q9BT22 464 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 SLC24A3Q9HC58 644 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 PXMP2Q9NR77 195 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.97□□□□□ -0.81
COL28A1-205ENST00000453441 PCDHA4Q9UN74 947 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 RPTORQ8N122 1335 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 LCTP09848 1927 aa9.97□□□□□ -0.81
COL28A1-205ENST00000453441 EIF3JO75822 258 aaKnown RBP9.96□□□□□ -0.82
COL28A1-205ENST00000453441 PDIA4P13667 645 aaKnown RBP9.96□□□□□ -0.82
COL28A1-205ENST00000453441 FDPSP14324 419 aaKnown RBP9.96□□□□□ -0.82
COL28A1-205ENST00000453441 ELNP15502 786 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 TAL1P17542 331 aaPredicted RBP9.96□□□□□ -0.82
COL28A1-205ENST00000453441 CNTN2Q02246 1040 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 ST3GAL1Q11201 340 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 SAFBQ15424 915 aaKnown RBP eCLIP9.96□□□□□ -0.82
COL28A1-205ENST00000453441 STXBP2Q15833 593 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 CCL14Q16627 93 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 KCNV1Q6PIU1 500 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 ARMCX2Q7L311 632 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 HMX1Q9NP08 348 aaPredicted RBP9.96□□□□□ -0.82
COL28A1-205ENST00000453441 FLRT1Q9NZU1 646 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 VPS54Q9P1Q0 977 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 SMC3Q9UQE7 1217 aa9.96□□□□□ -0.82
COL28A1-205ENST00000453441 SEPT4O43236 478 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 JAK2O60674 1132 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 CD2BP2O95400 341 aaKnown RBP9.95□□□□□ -0.82
COL28A1-205ENST00000453441 NR3C2P08235 984 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 CYBAP13498 195 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 AKR1A1P14550 325 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 PDCP20941 246 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 CCND2P30279 289 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 HOXA13P31271 388 aaPredicted RBP9.95□□□□□ -0.82
COL28A1-205ENST00000453441 CLK2P49760 499 aaKnown RBP9.95□□□□□ -0.82
COL28A1-205ENST00000453441 CACNB2Q08289 660 aaPredicted RBP9.95□□□□□ -0.82
COL28A1-205ENST00000453441 BECN1Q14457 450 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 GNPTABQ3T906 1256 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 COL13A1Q5TAT6 717 aaPredicted RBP9.95□□□□□ -0.82
COL28A1-205ENST00000453441 PCNX4Q63HM2 1172 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 FCHSD1Q86WN1 690 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 TNS4Q8IZW8 715 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 SH3TC2Q8TF17 1288 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 TBC1D5Q92609 795 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 CDHR1Q96JP9 859 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 C8orf76Q96K31 380 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 TAAR1Q96RJ0 339 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 PDCD2LQ9BRP1 358 aa9.95□□□□□ -0.82
COL28A1-205ENST00000453441 PHF20Q9BVI0 1012 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms