RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ZBBXA8MT70 800 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 SORBS3O60504 671 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 STAM2O75886 525 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 ZNF286BP0CG31 522 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 RFC2P35250 354 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 PBX2P40425 430 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 KIAA0753Q2KHM9 967 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 HSDL1Q3SXM5 330 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 USP17L6PQ6QN14 398 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 SGMS1Q86VZ5 419 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 MICU3Q86XE3 530 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 CCDC82Q8N4S0 544 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 CCDC155Q8N6L0 562 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 FANCBQ8NB91 859 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 ALG1Q9BT22 464 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 ZNF576Q9H609 170 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 SLC4A7Q9Y6M7 1214 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 PIK3CDO00329 1044 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 IQCF3P0C7M6 154 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 ACTN1P12814 892 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 FOSL2P15408 326 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 UBA1P22314 1058 aaKnown RBP14.85□□□□□ -0.03
CHD3-206ENST00000452447 PSEN2P49810 448 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 SP2Q02086 613 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 KRT32Q14532 448 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 MFSD10Q14728 455 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 RAB30Q15771 203 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 GDF6Q6KF10 455 aaPredicted RBP14.85□□□□□ -0.03
CHD3-206ENST00000452447 CAGE1Q8TC20 777 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 HDAC6Q9UBN7 1215 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 GTF2IRD1Q9UHL9 959 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 GBF1Q92538 1859 aa14.85□□□□□ -0.03
CHD3-206ENST00000452447 KAT6AQ92794 2004 aa14.84□□□□□ -0.03
CHD3-206ENST00000452447 FRMPD4Q14CM0 1322 aa14.84□□□□□ -0.03
CHD3-206ENST00000452447 F2P00734 622 aa14.84□□□□□ -0.03
CHD3-206ENST00000452447 MRPS9P82933 396 aaKnown RBP14.84□□□□□ -0.03
CHD3-206ENST00000452447 NEDD9Q14511 834 aa14.84□□□□□ -0.03
CHD3-206ENST00000452447 GRIN2CQ14957 1233 aa14.84□□□□□ -0.03
CHD3-206ENST00000452447 DHX32Q7L7V1 743 aaKnown RBP14.84□□□□□ -0.03
CHD3-206ENST00000452447 GPKOWQ92917 476 aaPredicted RBP eCLIP14.84□□□□□ -0.03
CHD3-206ENST00000452447 INPP4AQ96PE3 977 aaPredicted RBP14.84□□□□□ -0.03
CHD3-206ENST00000452447 FTOQ9C0B1 505 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHD3-206ENST00000452447 PSTPIP2Q9H939 334 aa14.84□□□□□ -0.03
CHD3-206ENST00000452447 RTEL1Q9NZ71 1219 aa14.84□□□□□ -0.03
CHD3-206ENST00000452447 TANC1Q9C0D5 1861 aa14.84□□□□□ -0.03
CHD3-206ENST00000452447 DOCK5Q9H7D0 1870 aa14.84□□□□□ -0.03
CHD3-206ENST00000452447 hCG_1642624A0A1W2PR95 340 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 NOP56O00567 594 aaKnown RBP14.83□□□□□ -0.04
CHD3-206ENST00000452447 MEIS2O14770 477 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 FIBPO43427 364 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 ICAM3P32942 547 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 TSGA10IPQ3SY00 556 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 XRRA1Q6P2D8 792 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 TMTC3Q6ZXV5 915 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 MAFAQ8NHW3 353 aaPredicted RBP14.83□□□□□ -0.04
CHD3-206ENST00000452447 AFAP1L1Q8TED9 768 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 TCEANC2Q96MN5 208 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 RBM28Q9NW13 759 aaKnown RBP14.83□□□□□ -0.04
CHD3-206ENST00000452447 CHD9Q3L8U1 2897 aa14.83□□□□□ -0.04
CHD3-206ENST00000452447 VCANP13611 3396 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 SPATA31C2B4DYI2 1134 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 HAS3O00219 553 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 HMGB1P09429 215 aaKnown RBP14.82□□□□□ -0.04
CHD3-206ENST00000452447 HOXD8P13378 290 aaPredicted RBP14.82□□□□□ -0.04
CHD3-206ENST00000452447 ATP2A2P16615 1042 aaKnown RBP14.82□□□□□ -0.04
CHD3-206ENST00000452447 FGD1P98174 961 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 EXOSC10Q01780 885 aaKnown RBP14.82□□□□□ -0.04
CHD3-206ENST00000452447 ADCK5Q3MIX3 580 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 PCNX4Q63HM2 1172 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 APOA5Q6Q788 366 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 NLRX1Q86UT6 975 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 RASEFQ8IZ41 740 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 VWCEQ96DN2 955 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 SLC28A3Q9HAS3 691 aa14.82□□□□□ -0.04
CHD3-206ENST00000452447 SPDYE3A6NKU9 549 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 ZBTB43O43298 467 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 SELPP16109 830 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 RTN1Q16799 776 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 CYFIP1Q7L576 1253 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 HEATR3Q7Z4Q2 680 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 CTAGE1Q96RT6 745 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 GAS2L1Q99501 681 aaPredicted RBP14.81□□□□□ -0.04
CHD3-206ENST00000452447 USP26Q9BXU7 913 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 CHD7Q9P2D1 2997 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 H3BRB1 525 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 PARNO95453 639 aaKnown RBP14.81□□□□□ -0.04
CHD3-206ENST00000452447 RABGGTBP53611 331 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 METTL7BQ6UX53 244 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 LRRC8DQ7L1W4 858 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHD3-206ENST00000452447 SENP7Q9BQF6 1050 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 C16orf70Q9BSU1 422 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 NKX2-4Q9H2Z4 354 aa14.81□□□□□ -0.04
CHD3-206ENST00000452447 TUT1Q9H6E5 874 aaKnown RBP14.81□□□□□ -0.04
CHD3-206ENST00000452447 NAP1L2Q9ULW6 460 aaPredicted RBP14.81□□□□□ -0.04
CHD3-206ENST00000452447 DLL1O00548 723 aa14.8□□□□□ -0.04
CHD3-206ENST00000452447 CKBP12277 381 aa14.8□□□□□ -0.04
CHD3-206ENST00000452447 SEMA3FQ13275 785 aa14.8□□□□□ -0.04
CHD3-206ENST00000452447 PTK7Q13308 1070 aa14.8□□□□□ -0.04
CHD3-206ENST00000452447 GIMAP8Q8ND71 665 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms