RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 TGFB3P10600 412 aa20.62■□□□□ 0.89
CTNS-204ENST00000452111 RCAN1P53805 252 aa20.62■□□□□ 0.89
CTNS-204ENST00000452111 NAPAP54920 295 aa20.62■□□□□ 0.89
CTNS-204ENST00000452111 HSDL1Q3SXM5 330 aa20.62■□□□□ 0.89
CTNS-204ENST00000452111 PCNX4Q63HM2 1172 aa20.62■□□□□ 0.89
CTNS-204ENST00000452111 WNT8AQ9H1J5 351 aa20.62■□□□□ 0.89
CTNS-204ENST00000452111 MLXIPQ9HAP2 919 aa20.62■□□□□ 0.89
CTNS-204ENST00000452111 SCN10AQ9Y5Y9 1956 aa20.61■□□□□ 0.89
CTNS-204ENST00000452111 KIAA1217Q5T5P2 1943 aa20.61■□□□□ 0.89
CTNS-204ENST00000452111 ADD1P35611 737 aaKnown RBP20.61■□□□□ 0.89
CTNS-204ENST00000452111 PTPN11Q06124 597 aaPredicted RBP20.61■□□□□ 0.89
CTNS-204ENST00000452111 TMEM240Q5SV17 173 aa20.61■□□□□ 0.89
CTNS-204ENST00000452111 TYW1BQ6NUM6 668 aa20.61■□□□□ 0.89
CTNS-204ENST00000452111 C16orf59Q7L2K0 433 aa20.61■□□□□ 0.89
CTNS-204ENST00000452111 NOD1Q9Y239 953 aa20.61■□□□□ 0.89
CTNS-204ENST00000452111 SPDYE3A6NKU9 549 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 FIBPO43427 364 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 EPB41L2O43491 1005 aaKnown RBP20.6■□□□□ 0.89
CTNS-204ENST00000452111 ICAM3P32942 547 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 PSEN2P49810 448 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 SEMA3FQ13275 785 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 XRRA1Q6P2D8 792 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 PSRC1Q6PGN9 363 aaPredicted RBP20.6■□□□□ 0.89
CTNS-204ENST00000452111 SCLYQ96I15 445 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 ALG1Q9BT22 464 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 KATNAL1Q9BW62 490 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 USP26Q9BXU7 913 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 BCAS3Q9H6U6 928 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 IL23AQ9NPF7 189 aa20.6■□□□□ 0.89
CTNS-204ENST00000452111 CCDC196A0A1B0GTZ2 297 aa20.59■□□□□ 0.89
CTNS-204ENST00000452111 SPATA31C2B4DYI2 1134 aa20.59■□□□□ 0.89
CTNS-204ENST00000452111 F2P00734 622 aa20.59■□□□□ 0.89
CTNS-204ENST00000452111 MFSD10Q14728 455 aa20.59■□□□□ 0.89
CTNS-204ENST00000452111 ZNF365Q70YC5 407 aa20.59■□□□□ 0.89
CTNS-204ENST00000452111 PCDHA6Q9UN73 950 aa20.59■□□□□ 0.89
CTNS-204ENST00000452111 PCDHA8Q9Y5H6 950 aa20.59■□□□□ 0.89
CTNS-204ENST00000452111 STXBP3O00186 592 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 NOP56O00567 594 aaKnown RBP20.58■□□□□ 0.89
CTNS-204ENST00000452111 PPFIA4O75335 1185 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 HOXD8P13378 290 aaPredicted RBP20.58■□□□□ 0.89
CTNS-204ENST00000452111 SMAD3P84022 425 aaKnown RBP20.58■□□□□ 0.89
CTNS-204ENST00000452111 NEDD9Q14511 834 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 PTGISQ16647 500 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 KIAA0753Q2KHM9 967 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 GDF6Q6KF10 455 aaPredicted RBP20.58■□□□□ 0.89
CTNS-204ENST00000452111 PPP1R18Q6NYC8 613 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 CYFIP1Q7L576 1253 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 NLRX1Q86UT6 975 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 SESTD1Q86VW0 696 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 FBXL16Q8N461 479 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 C7orf31Q8N865 590 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 FAM161BQ96MY7 647 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 AGXT2Q9BYV1 514 aa20.58■□□□□ 0.89
CTNS-204ENST00000452111 hCG_1984214I3L0E3 225 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 ADCY7P51828 1080 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 SP4Q02446 784 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 METTL7BQ6UX53 244 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 RUFY3Q7L099 469 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 ZNF713Q8N859 430 aaPredicted RBP20.57■□□□□ 0.88
CTNS-204ENST00000452111 PGBD1Q96JS3 809 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 EHMT1Q9H9B1 1298 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 ZSWIM6Q9HCJ5 1215 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 RIC8AQ9NPQ8 531 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 BARHL2Q9NY43 387 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 HDAC6Q9UBN7 1215 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 GTF2IRD1Q9UHL9 959 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 NID2Q14112 1375 aa20.57■□□□□ 0.88
CTNS-204ENST00000452111 SMCO2A6NFE2 343 aa20.56■□□□□ 0.88
CTNS-204ENST00000452111 HAS3O00219 553 aa20.56■□□□□ 0.88
CTNS-204ENST00000452111 PPFIA3O75145 1194 aa20.56■□□□□ 0.88
CTNS-204ENST00000452111 ZNF697Q5TEC3 545 aa20.56■□□□□ 0.88
CTNS-204ENST00000452111 UPF3BQ9BZI7 483 aaKnown RBP20.56■□□□□ 0.88
CTNS-204ENST00000452111 MTMR10Q9NXD2 777 aa20.56■□□□□ 0.88
CTNS-204ENST00000452111 CYP46A1Q9Y6A2 500 aa20.56■□□□□ 0.88
CTNS-204ENST00000452111 FGBP02675 491 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 LGALS2P05162 132 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 ITGB5P18084 799 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 CCT2P78371 535 aaKnown RBP20.55■□□□□ 0.88
CTNS-204ENST00000452111 BFSP2Q13515 415 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 PFKFB3Q16875 520 aaPredicted RBP20.55■□□□□ 0.88
CTNS-204ENST00000452111 FAM109BQ6ICB4 259 aaPredicted RBP20.55■□□□□ 0.88
CTNS-204ENST00000452111 OTOP2Q7RTS6 562 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 DEFB128Q7Z7B8 93 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 RETREG2Q8NC44 543 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 PHKBQ93100 1093 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 GPRASP2Q96D09 838 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 CTAGE1Q96RT6 745 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 C16orf70Q9BSU1 422 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 PKD2L1Q9P0L9 805 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 TELO2Q9Y4R8 837 aa20.55■□□□□ 0.88
CTNS-204ENST00000452111 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.54■□□□□ 0.88
CTNS-204ENST00000452111 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.54■□□□□ 0.88
CTNS-204ENST00000452111 PITPNM1O00562 1244 aa20.54■□□□□ 0.88
CTNS-204ENST00000452111 SCG2P13521 617 aa20.54■□□□□ 0.88
CTNS-204ENST00000452111 PDIA3P30101 505 aaKnown RBP20.54■□□□□ 0.88
CTNS-204ENST00000452111 MTMR1Q13613 665 aa20.54■□□□□ 0.88
CTNS-204ENST00000452111 TOB2Q14106 344 aaPredicted RBP20.54■□□□□ 0.88
CTNS-204ENST00000452111 RASIP1Q5U651 963 aa20.54■□□□□ 0.88
CTNS-204ENST00000452111 RPUSD2Q8IZ73 545 aaKnown RBP20.54■□□□□ 0.88
CTNS-204ENST00000452111 HERVK_113Q902F9 699 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms