RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ARP10275 920 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 TXNP10599 105 aaKnown RBP14.81□□□□□ -0.04
VPS33A-202ENST00000451053 ICAM3P32942 547 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 SP2Q02086 613 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 MTMR1Q13613 665 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 TTLL4Q14679 1199 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 LY6KQ17RY6 165 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 DUSP28Q4G0W2 176 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 LHX8Q68G74 356 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 PLA2G4DQ86XP0 818 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 COPS5Q92905 334 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 LENG9Q96B70 501 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 ABHD8Q96I13 439 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 DEFB118Q96PH6 123 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 DDX41Q9UJV9 622 aaKnown RBP14.81□□□□□ -0.04
VPS33A-202ENST00000451053 GNEQ9Y223 722 aaKnown RBP14.81□□□□□ -0.04
VPS33A-202ENST00000451053 ATP6V1DQ9Y5K8 247 aa14.81□□□□□ -0.04
VPS33A-202ENST00000451053 FRMPD3Q5JV73 1810 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 CYP3A7-CYP3A51PA0A087WV96 503 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 SLC37A4O43826 429 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 SORBS3O60504 671 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 BRD1O95696 1058 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 RARBP10826 455 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 ATP2B1P20020 1258 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 UBA1P22314 1058 aaKnown RBP14.8□□□□□ -0.04
VPS33A-202ENST00000451053 CYP3A7P24462 503 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 RESTQ13127 1097 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 PKP1Q13835 747 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 PRR16Q569H4 304 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 NIPA1Q7RTP0 329 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 MBOAT7Q96N66 472 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 UIMC1Q96RL1 719 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 BCAS3Q9H6U6 928 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 KCNH7Q9NS40 1196 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 MYH15Q9Y2K3 1946 aa14.8□□□□□ -0.04
VPS33A-202ENST00000451053 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 CCNT1O60563 726 aaKnown RBP14.79□□□□□ -0.04
VPS33A-202ENST00000451053 MSCO60682 206 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 ATP9AO75110 1047 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 DUSP11O75319 330 aaKnown RBP14.79□□□□□ -0.04
VPS33A-202ENST00000451053 GJB1P08034 283 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 TGFB3P10600 412 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 TOB1P50616 345 aaPredicted RBP14.79□□□□□ -0.04
VPS33A-202ENST00000451053 IRX5P78411 483 aaPredicted RBP14.79□□□□□ -0.04
VPS33A-202ENST00000451053 NBR1Q14596 966 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 Q4G0T1 1027 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 FOXD4L5Q5VV16 416 aaPredicted RBP14.79□□□□□ -0.04
VPS33A-202ENST00000451053 KCNV1Q6PIU1 500 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 MOXD1Q6UVY6 613 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 TLK2Q86UE8 772 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 U2AF1L4Q8WU68 220 aaKnown RBP14.79□□□□□ -0.04
VPS33A-202ENST00000451053 FOXD4L4Q8WXT5 416 aaPredicted RBP14.79□□□□□ -0.04
VPS33A-202ENST00000451053 DDX25Q9UHL0 483 aaKnown RBP14.79□□□□□ -0.04
VPS33A-202ENST00000451053 SYNRGQ9UMZ2 1314 aa14.79□□□□□ -0.04
VPS33A-202ENST00000451053 NKRFO15226 690 aaKnown RBP eCLIP14.78□□□□□ -0.04
VPS33A-202ENST00000451053 GGPS1O95749 300 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 PGK1P00558 417 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 GCFC2P16383 781 aaKnown RBP14.78□□□□□ -0.04
VPS33A-202ENST00000451053 KCNA2P16389 499 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 SETQ01105 290 aaPredicted RBP14.78□□□□□ -0.04
VPS33A-202ENST00000451053 ARHGAP1Q07960 439 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 ITGB3BPQ13352 177 aaPredicted RBP14.78□□□□□ -0.04
VPS33A-202ENST00000451053 TTC38Q5R3I4 469 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 PPP4R3AQ6IN85 833 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 GJA10Q969M2 543 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 CDHR1Q96JP9 859 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 TMEM106CQ9BVX2 250 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 UPF3AQ9H1J1 476 aaKnown RBP14.78□□□□□ -0.04
VPS33A-202ENST00000451053 ZSCAN16Q9H4T2 348 aaPredicted RBP14.78□□□□□ -0.04
VPS33A-202ENST00000451053 AGO4Q9HCK5 861 aaKnown RBP14.78□□□□□ -0.04
VPS33A-202ENST00000451053 XPNPEP3Q9NQH7 507 aa14.78□□□□□ -0.04
VPS33A-202ENST00000451053 NOL7Q9UMY1 257 aaKnown RBP14.78□□□□□ -0.04
VPS33A-202ENST00000451053 MYADML2A6NDP7 307 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 CTAGE5O15320 804 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 MSH4O15457 936 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 MAFGO15525 162 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 DYNC1LI2O43237 492 aaPredicted RBP14.77□□□□□ -0.05
VPS33A-202ENST00000451053 ADAMTS4O75173 837 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 SGPL1O95470 568 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 F13A1P00488 732 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 GH1P01241 217 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 MCM7P33993 719 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 TRAPPC10P48553 1259 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 ZNF174Q15697 407 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 CELF3Q5SZQ8 465 aaKnown RBP14.77□□□□□ -0.05
VPS33A-202ENST00000451053 MYSM1Q5VVJ2 828 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 CYFIP1Q7L576 1253 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 BRAPQ7Z569 592 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 POTEDQ86YR6 584 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 OR6J1Q8NGC5 347 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 NAP1L4Q99733 375 aaKnown RBP14.77□□□□□ -0.05
VPS33A-202ENST00000451053 SENP7Q9BQF6 1050 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 ZNF577Q9BSK1 485 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 CRISPLD2Q9H0B8 497 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 OGDHLQ9ULD0 1010 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 Q9Y3F1 56 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 TELO2Q9Y4R8 837 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 DOCK5Q9H7D0 1870 aa14.77□□□□□ -0.05
VPS33A-202ENST00000451053 IPO5O00410 1097 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms