RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 PPP1R12BO60237 982 aaPredicted RBP9.01□□□□□ -0.97
LINC00954-202ENST00000449086 ATP2C2O75185 946 aa9.01□□□□□ -0.97
LINC00954-202ENST00000449086 FGRP09769 529 aa9.01□□□□□ -0.97
LINC00954-202ENST00000449086 SCP2P22307 547 aa9.01□□□□□ -0.97
LINC00954-202ENST00000449086 SARSP49591 514 aaKnown RBP9.01□□□□□ -0.97
LINC00954-202ENST00000449086 GSCP56915 257 aaPredicted RBP9.01□□□□□ -0.97
LINC00954-202ENST00000449086 CYP27A1Q02318 531 aa9.01□□□□□ -0.97
LINC00954-202ENST00000449086 CKAP4Q07065 602 aaKnown RBP9.01□□□□□ -0.97
LINC00954-202ENST00000449086 ACTN3Q08043 901 aaPredicted RBP9.01□□□□□ -0.97
LINC00954-202ENST00000449086 CCNI2Q6ZMN8 369 aaPredicted RBP9.01□□□□□ -0.97
LINC00954-202ENST00000449086 C16orf86Q6ZW13 317 aa9.01□□□□□ -0.97
LINC00954-202ENST00000449086 ZSCAN29Q8IWY8 852 aaPredicted RBP9.01□□□□□ -0.97
LINC00954-202ENST00000449086 ARL8AQ96BM9 186 aa9.01□□□□□ -0.97
LINC00954-202ENST00000449086 CCDC51Q96ER9 411 aa9.01□□□□□ -0.97
LINC00954-202ENST00000449086 LUC7L2Q9Y383 392 aaKnown RBP9.01□□□□□ -0.97
LINC00954-202ENST00000449086 POLR2AP24928 1970 aaKnown RBP9.01□□□□□ -0.97
LINC00954-202ENST00000449086 CCDC196A0A1B0GTZ2 297 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 USP17L12C9JPN9 530 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 USP17L21D6R901 530 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 KRT86O43790 486 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 KRT14P02533 472 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 IREB2P48200 963 aaKnown RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 CDR1P51861 262 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 RILPL1Q5EBL4 403 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 NOL9Q5SY16 702 aaKnown RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 NBPF12Q5TAG4 269 aaPredicted RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 TATDN1Q6P1N9 297 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 ARMC9Q7Z3E5 817 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 OXER1Q8TDS5 423 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 HHIPL1Q96JK4 782 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 RNF41Q9H4P4 317 aaPredicted RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 DONSONQ9NYP3 566 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 SMARCAL1Q9NZC9 954 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 VPS54Q9P1Q0 977 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 FAM237AA0A1B0GTK4 181 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 TTC26A0AVF1 554 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 FAM205CA6NFA0 338 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 PDE2AO00408 941 aaPredicted RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 COPB1P53618 953 aaKnown RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 GUCY1A3Q02108 690 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 CCDC181Q5TID7 509 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 N4BP2L2Q92802 583 aaPredicted RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 HAUS4Q9H6D7 363 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 FAM217BQ9NTX9 383 aaPredicted RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 DMGDHQ9UI17 866 aaKnown RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 FAM184BQ9ULE4 1060 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 BAZ2AQ9UIF9 1905 aaKnown RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 A0A087X0B3 334 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 KCNJ18B7U540 433 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 SH2B2O14492 632 aaPredicted RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 HSF2BPO75031 334 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 TRIM21P19474 475 aaKnown RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 DPYDQ12882 1025 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 IFT88Q13099 833 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 KCNJ12Q14500 433 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 NT5DC1Q5TFE4 455 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 B4GALNT4Q76KP1 1039 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 C2orf69Q8N8R5 385 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 RASSF8Q8NHQ8 419 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 SMCR8Q8TEV9 937 aaPredicted RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 SYMPKQ92797 1274 aaKnown RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 PAGE5Q96GU1 130 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 CCDC17Q96LX7 622 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 LRRC1Q9BTT6 524 aa9□□□□□ -0.97
LINC00954-202ENST00000449086 REXO2Q9Y3B8 237 aaKnown RBP9□□□□□ -0.97
LINC00954-202ENST00000449086 PLIN4Q96Q06 1357 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 ORC4O43929 436 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 OPA1O60313 960 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 CTNND1O60716 968 aaKnown RBP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 SHOX2O60902 331 aaPredicted RBP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 MMP1P03956 469 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 PBX1P40424 430 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 SEC24CP53992 1094 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 PPP2R5AQ15172 486 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 CCDC96Q2M329 555 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 CRACR2BQ8N4Y2 399 aaPredicted RBP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 OR8K1Q8NGG5 319 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 STAG1Q8WVM7 1258 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 IFT81Q8WYA0 676 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 SCLT1Q96NL6 688 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 LACRTQ9GZZ8 138 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 GBA2Q9HCG7 927 aaPredicted RBP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 EHD2Q9NZN4 543 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 SAP30BPQ9UHR5 308 aaKnown RBP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 CEP131Q9UPN4 1083 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 DOCK1Q14185 1865 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 HPDP32754 393 aaPredicted RBP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 NAP1L1P55209 391 aaKnown RBP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 CUL4BQ13620 913 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 LDLRAD1Q5T700 205 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 CDKAL1Q5VV42 579 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 IQCEQ6IPM2 695 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 RPAINQ86UA6 219 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 KIRREL3Q8IZU9 778 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 FBXL16Q8N461 479 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC00954-202ENST00000449086 KLRG1Q96E93 195 aa8.99□□□□□ -0.97
LINC00954-202ENST00000449086 CNNM2Q9H8M5 875 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms