RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 UBE2SQ16763 222 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 HSDL1Q3SXM5 330 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 NFRKBQ6P4R8 1299 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 DHX37Q8IY37 1157 aaKnown RBP16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 CUL5Q93034 780 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 CTAGE1Q96RT6 745 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 NOC4LQ9BVI4 516 aaKnown RBP16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 RIC8AQ9NPQ8 531 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 RTEL1Q9NZ71 1219 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 CYP46A1Q9Y6A2 500 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 hCG_1984214I3L0E3 225 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 HAS3O00219 553 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 ADAMTS3O15072 1205 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 PRPF3O43395 683 aaKnown RBP16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 GGPS1O95749 300 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 ITGB5P18084 799 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 PTPN11Q06124 597 aaPredicted RBP16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 DGKDQ16760 1214 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 PFKFB3Q16875 520 aaPredicted RBP16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 PPP1R18Q6NYC8 613 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 ZNF713Q8N859 430 aaPredicted RBP16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 PPP1R13LQ8WUF5 828 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 SENP7Q9BQF6 1050 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 TRMT13Q9NUP7 481 aaKnown RBP16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 PCDHA6Q9UN73 950 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 PCDHA8Q9Y5H6 950 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 UBIAD1Q9Y5Z9 338 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 UMODL1Q5DID0 1318 aa16.17■□□□□ 0.18
RTFDC1-204ENST00000449062 SEC24BO95487 1268 aa16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 IFNAR1P17181 557 aa16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 CYP2C18P33260 490 aa16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 CLK2P49760 499 aaKnown RBP16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 FPGSQ05932 587 aa16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 GPR153Q6NV75 609 aa16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 ZNF274Q96GC6 653 aaPredicted RBP16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 C16orf70Q9BSU1 422 aa16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 TELO2Q9Y4R8 837 aa16.16■□□□□ 0.18
RTFDC1-204ENST00000449062 SMCO2A6NFE2 343 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 FIBPO43427 364 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 ATP9AO75110 1047 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 SUPT20HL2P0C7V6 817 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 SCG2P13521 617 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 CSF2RAP15509 400 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 NAPAP54920 295 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 ANAPC15P60006 121 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 GNPTABQ3T906 1256 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 RASIP1Q5U651 963 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 SPATA33Q96N06 139 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 PPP1R12CQ9BZL4 782 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 WNT8AQ9H1J5 351 aa16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 NCOA5Q9HCD5 579 aaKnown RBP16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
RTFDC1-204ENST00000449062 ESYT2A0FGR8 921 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 F2P00734 622 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 FOSP01100 380 aaPredicted RBP16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 CYP2C9P11712 490 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 CCT2P78371 535 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 NEDD9Q14511 834 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 TMEM240Q5SV17 173 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 METTL7BQ6UX53 244 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 CRYGNQ8WXF5 182 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 PHKBQ93100 1093 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 GPRASP2Q96D09 838 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.14■□□□□ 0.179e-7■□□□□ 10.7
RTFDC1-204ENST00000449062 LARP6Q9BRS8 491 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 ZMYND12Q9H0C1 365 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 HIPK3Q9H422 1215 aa16.14■□□□□ 0.17
RTFDC1-204ENST00000449062 SPDYE3A6NKU9 549 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 MAFGO15525 162 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 SORBS3O60504 671 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 KCNA2P16389 499 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 PSEN2P49810 448 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 ADCY7P51828 1080 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 HIC1Q14526 733 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 GDF6Q6KF10 455 aaPredicted RBP16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 CYFIP1Q7L576 1253 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 TMEM199Q8N511 208 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 CYP2W1Q8TAV3 490 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 GPR20Q99678 358 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 RNF26Q9BY78 433 aaPredicted RBP16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 GLT8D2Q9H1C3 349 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 MLXIPQ9HAP2 919 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 JADE2Q9NQC1 790 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 PDRG1Q9NUG6 133 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 TMEM260Q9NX78 707 aa16.13■□□□□ 0.17
RTFDC1-204ENST00000449062 PPFIA3O75145 1194 aa16.12■□□□□ 0.17
RTFDC1-204ENST00000449062 ZNF286BP0CG31 522 aa16.12■□□□□ 0.17
RTFDC1-204ENST00000449062 HOXC8P31273 242 aa16.12■□□□□ 0.17
RTFDC1-204ENST00000449062 PPIGQ13427 754 aaKnown RBP eCLIP16.12■□□□□ 0.175e-8■□□□□ 11
RTFDC1-204ENST00000449062 KIAA0753Q2KHM9 967 aa16.12■□□□□ 0.17
RTFDC1-204ENST00000449062 NLRX1Q86UT6 975 aa16.12■□□□□ 0.17
RTFDC1-204ENST00000449062 MXRA8Q9BRK3 442 aa16.12■□□□□ 0.17
RTFDC1-204ENST00000449062 IL23AQ9NPF7 189 aa16.12■□□□□ 0.17
RTFDC1-204ENST00000449062 HDAC6Q9UBN7 1215 aa16.12■□□□□ 0.17
RTFDC1-204ENST00000449062 GTF2IRD1Q9UHL9 959 aa16.12■□□□□ 0.17
RTFDC1-204ENST00000449062 MYH7BA7E2Y1 1941 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 MEIS1O00470 390 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 EDIL3O43854 480 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms