RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 IL27Q8NEV9 243 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 KAT2BQ92831 832 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 MTMR8Q96EF0 704 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 IL17RAQ96F46 866 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 SENP2Q9HC62 589 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 ZSWIM6Q9HCJ5 1215 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 MRVI1Q9Y6F6 885 aa15.89■□□□□ 0.13
PDLIM2-213ENST00000448520 BAZ2BQ9UIF8 2168 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 ZBTB5O15062 677 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 PRC1O43663 620 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 CA3P07451 260 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 TGFB3P10600 412 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 SELPP16109 830 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 EIF2AK2P19525 551 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 KCNJ6P48051 423 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 RBL2Q08999 1139 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 SEC23AQ15436 765 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 AAK1Q2M2I8 961 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 HERC6Q8IVU3 1022 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 DHX37Q8IY37 1157 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 STAG2Q8N3U4 1231 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 C7orf31Q8N865 590 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 PPTC7Q8NI37 304 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 PPP1R13LQ8WUF5 828 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 LARP6Q9BRS8 491 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 GTF2IRD1Q9UHL9 959 aa15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 SPTBN5Q9NRC6 3674 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-213ENST00000448520 CHD7Q9P2D1 2997 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 PALM3A6NDB9 673 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 RPS6KB1P23443 525 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 PSEN2P49810 448 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 EXOSC10Q01780 885 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 RUFY3Q7L099 469 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 DHX32Q7L7V1 743 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 VSIG10LQ86VR7 867 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 PDCD2LQ9BRP1 358 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 TM6SF1Q9BZW5 370 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 HDAC6Q9UBN7 1215 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 MAD2L2Q9UI95 211 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 PCDHA1Q9Y5I3 950 aa15.87■□□□□ 0.13
PDLIM2-213ENST00000448520 ERICH2A1L162 156 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 HAS3O00219 553 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 EFCAB14O75071 495 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 PSMA5P28066 241 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 MCM5P33992 734 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 PTK7Q13308 1070 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 CNKSR3Q6P9H4 555 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 LRRC8DQ7L1W4 858 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 CTAGE1Q96RT6 745 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 CYP46A1Q9Y6A2 500 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 MTCH2Q9Y6C9 303 aa15.86■□□□□ 0.13
PDLIM2-213ENST00000448520 ABHD14A-ACY1A0A1B0GW23 586 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 GCOM1H8Y6P7 765 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 OPLAHO14841 1288 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 IFIT3O14879 490 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 TLL1O43897 1013 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 CD2BP2O95400 341 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 F2P00734 622 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 CXCL10P02778 98 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 POLR2MP0CAP2 368 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 CKBP12277 381 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 MYCLP12524 364 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 HOXD8P13378 290 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 NEK4P51957 841 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 TAP1Q03518 808 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 MFSD10Q14728 455 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 KIAA0753Q2KHM9 967 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 CELF3Q5SZQ8 465 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 MYSM1Q5VVJ2 828 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 Q6ZUG5 572 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 MICALL1Q8N3F8 863 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 ADAMTS19Q8TE59 1207 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 UHRF1Q96T88 793 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 ALG1Q9BT22 464 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 RIOX1Q9H6W3 641 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 TSHZ2Q9NRE2 1034 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 PDRG1Q9NUG6 133 aa15.85■□□□□ 0.13
PDLIM2-213ENST00000448520 SH2B2O14492 632 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 GRM4Q14833 912 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 GPNMBQ14956 572 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 SART3Q15020 963 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 PGM5Q15124 567 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 RABEP1Q15276 862 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 RAB11FIP4Q86YS3 637 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 IGDCC4Q8TDY8 1250 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 ARNTL2Q8WYA1 636 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 DHX38Q92620 1227 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 SPATA33Q96N06 139 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 ZBED2Q9BTP6 218 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 CERS4Q9HA82 394 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 COG5Q9UP83 839 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 TANC1Q9C0D5 1861 aa15.84■□□□□ 0.13
PDLIM2-213ENST00000448520 PNMA6FA0A0J9YX94 578 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 RFXAPO00287 272 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 PPP1R11O60927 126 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 RGS20O76081 388 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 HMGB1P09429 215 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 BMP1P13497 986 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 CCND2P30279 289 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 AK2P54819 239 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms