RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 GNPTABQ3T906 1256 aa14.63□□□□□ -0.07
PRPF40A-203ENST00000448428 XRRA1Q6P2D8 792 aa14.63□□□□□ -0.07
PRPF40A-203ENST00000448428 PPTC7Q8NI37 304 aa14.63□□□□□ -0.07
PRPF40A-203ENST00000448428 ALDH8A1Q9H2A2 487 aaPredicted RBP14.63□□□□□ -0.07
PRPF40A-203ENST00000448428 NCOA5Q9HCD5 579 aaKnown RBP14.63□□□□□ -0.07
PRPF40A-203ENST00000448428 PDRG1Q9NUG6 133 aa14.63□□□□□ -0.07
PRPF40A-203ENST00000448428 SPDYE3A6NKU9 549 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 hCG_1984214I3L0E3 225 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 PPFIA3O75145 1194 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 PPFIA4O75335 1185 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 SEC24BO95487 1268 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 SCG2P13521 617 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 UBA1P22314 1058 aaKnown RBP14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 CHMP4BP1P59074 171 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 SEMA3FQ13275 785 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 PKN1Q16512 942 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 DGKDQ16760 1214 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 HSDL1Q3SXM5 330 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 LRIT3Q3SXY7 679 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 FAM47CQ5HY64 1035 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 C9orf50Q5SZB4 431 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 MFSD5Q6N075 450 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 PPP1R18Q6NYC8 613 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 ZNF713Q8N859 430 aaPredicted RBP14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 KAT2BQ92831 832 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 PHKBQ93100 1093 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 ZNF274Q96GC6 653 aaPredicted RBP14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 SPATA33Q96N06 139 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 PPP1R12CQ9BZL4 782 aa14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 TRMT13Q9NUP7 481 aaKnown RBP14.62□□□□□ -0.07
PRPF40A-203ENST00000448428 FIBPO43427 364 aa14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 HOXD8P13378 290 aaPredicted RBP14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 CYP2C18P33260 490 aa14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 ADCY7P51828 1080 aa14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 ANAPC15P60006 121 aa14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 FPGSQ05932 587 aa14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 NFRKBQ6P4R8 1299 aa14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 TEX2Q8IWB9 1127 aa14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 LRCH3Q96II8 777 aa14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 MLXIPQ9HAP2 919 aa14.61□□□□□ -0.07
PRPF40A-203ENST00000448428 ADAMTS3O15072 1205 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 SUPT20HL2P0C7V6 817 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 ZNF286BP0CG31 522 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 IFNAR1P17181 557 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 ITGB5P18084 799 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 CLK2P49760 499 aaKnown RBP14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 PTPN11Q06124 597 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 NEDD9Q14511 834 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 CYFIP1Q7L576 1253 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 NLRX1Q86UT6 975 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 PGBD1Q96JS3 809 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 NOC4LQ9BVI4 516 aaKnown RBP14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 SLC26A6Q9BXS9 759 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 RNF26Q9BY78 433 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 HIPK3Q9H422 1215 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 TMEM260Q9NX78 707 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 UBIAD1Q9Y5Z9 338 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 UMODL1Q5DID0 1318 aa14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 TRIP12Q14669 1992 aaPredicted RBP14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 RANBP2P49792 3224 aaKnown RBP14.6□□□□□ -0.07
PRPF40A-203ENST00000448428 HAS3O00219 553 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 EIF5BO60841 1220 aaKnown RBP14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 ATP9AO75110 1047 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 FOSP01100 380 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 CYP2C9P11712 490 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 CSF2RAP15509 400 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 PSEN2P49810 448 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 AKAP17AQ02040 695 aaKnown RBP14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 STK3Q13188 491 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 C16orf59Q7L2K0 433 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 TMEM199Q8N511 208 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 GPRASP2Q96D09 838 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 IL17RAQ96F46 866 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 SENP7Q9BQF6 1050 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 C16orf70Q9BSU1 422 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 ZMYND12Q9H0C1 365 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 GLT8D2Q9H1C3 349 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 EHMT1Q9H9B1 1298 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 TELO2Q9Y4R8 837 aa14.59□□□□□ -0.07
PRPF40A-203ENST00000448428 ESYT2A0FGR8 921 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 F2P00734 622 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 PPIGQ13427 754 aaKnown RBP eCLIP14.58□□□□□ -0.081e-9■■□□□ 11.8
PRPF40A-203ENST00000448428 MFSD10Q14728 455 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 KIAA0753Q2KHM9 967 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 JAKMIP3Q5VZ66 844 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 METTL7BQ6UX53 244 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 SESTD1Q86VW0 696 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 CYP2W1Q8TAV3 490 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 MXRA8Q9BRK3 442 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 ALG1Q9BT22 464 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 ANO3Q9BYT9 981 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 C6orf50Q9HD87 102 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 JADE2Q9NQC1 790 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 HDAC6Q9UBN7 1215 aa14.58□□□□□ -0.08
PRPF40A-203ENST00000448428 NOP56O00567 594 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 MAFGO15525 162 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 ACRP10323 421 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 KCNA2P16389 499 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 CCL23P55773 120 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 SSRP1Q08945 709 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms