RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 FOSP01100 380 aaPredicted RBP13.62□□□□□ -0.23
RFC4-208ENST00000447345 RTP1P59025 263 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 CHMP4BP1P59074 171 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 PSMC6P62333 389 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 SP2Q02086 613 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 SEMA3FQ13275 785 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 TRIM60Q495X7 471 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 SLC39A5Q6ZMH5 540 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 NLRX1Q86UT6 975 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 DHX37Q8IY37 1157 aaKnown RBP13.62□□□□□ -0.23
RFC4-208ENST00000447345 BICD2Q8TD16 824 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 AFG1LQ8WV93 481 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 SH3GLB2Q9NR46 395 aa13.62□□□□□ -0.23
RFC4-208ENST00000447345 TRIP12Q14669 1992 aaPredicted RBP13.62□□□□□ -0.23
RFC4-208ENST00000447345 ZEB2O60315 1214 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 PQBP1O60828 265 aaKnown RBP13.61□□□□□ -0.23
RFC4-208ENST00000447345 STAM2O75886 525 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 MMP3P08254 477 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 FDPSP14324 419 aaKnown RBP13.61□□□□□ -0.23
RFC4-208ENST00000447345 ITGB5P18084 799 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 SREBF1P36956 1147 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 NKX3-2P78367 333 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 ARHGAP4P98171 946 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 SP4Q02446 784 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 MTMR1Q13613 665 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 XRRA1Q6P2D8 792 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 PPP1R13LQ8WUF5 828 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 ZSCAN31Q96LW9 406 aaPredicted RBP13.61□□□□□ -0.23
RFC4-208ENST00000447345 BCAS3Q9H6U6 928 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 SH2B1Q9NRF2 756 aaPredicted RBP13.61□□□□□ -0.23
RFC4-208ENST00000447345 ZMYND8Q9ULU4 1186 aaPredicted RBP13.61□□□□□ -0.23
RFC4-208ENST00000447345 PCDHA4Q9UN74 947 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 KAT6AQ92794 2004 aa13.61□□□□□ -0.23
RFC4-208ENST00000447345 SPATA31C2B4DYI2 1134 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 H0YGN5 161 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 ZNF286BP0CG31 522 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 SYN1P17600 705 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 XBP1P17861 261 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 ICAM3P32942 547 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 ZNF76P36508 570 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
RFC4-208ENST00000447345 BRDTQ58F21 947 aaPredicted RBP13.6□□□□□ -0.23
RFC4-208ENST00000447345 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 BLIDQ8IZY5 108 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 CYP2W1Q8TAV3 490 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 WASF1Q92558 559 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 SPATA33Q96N06 139 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 UIMC1Q96RL1 719 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 MLXIPQ9HAP2 919 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 PRDM5Q9NQX1 630 aaPredicted RBP13.6□□□□□ -0.23
RFC4-208ENST00000447345 POLR3EQ9NVU0 708 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 UBIAD1Q9Y5Z9 338 aa13.6□□□□□ -0.23
RFC4-208ENST00000447345 MYH9P35579 1960 aaKnown RBP13.6□□□□□ -0.23
RFC4-208ENST00000447345 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
RFC4-208ENST00000447345 A6NJR5 290 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 LAMC2Q13753 1193 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 SNX17Q15036 470 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 NPY5RQ15761 445 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 CELF3Q5SZQ8 465 aaKnown RBP13.59□□□□□ -0.23
RFC4-208ENST00000447345 MYSM1Q5VVJ2 828 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 CYFIP1Q7L576 1253 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 TEX2Q8IWB9 1127 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 GPRASP2Q96D09 838 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 MXRA8Q9BRK3 442 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 PHF20Q9BVI0 1012 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 JADE2Q9NQC1 790 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 NR2E3Q9Y5X4 410 aa13.59□□□□□ -0.23
RFC4-208ENST00000447345 NOP56O00567 594 aaKnown RBP13.58□□□□□ -0.24
RFC4-208ENST00000447345 ATP9AO75110 1047 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 TGFB3P10600 412 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 KCNA2P16389 499 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 GUCY1B3Q02153 619 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 TLE2Q04725 743 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 NEDD9Q14511 834 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 HSDL1Q3SXM5 330 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 CEP55Q53EZ4 464 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 FAM47CQ5HY64 1035 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 MCTP2Q6DN12 878 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 DAGLBQ8NCG7 672 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 PPTC7Q8NI37 304 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 EMID1Q96A84 441 aaPredicted RBP13.58□□□□□ -0.24
RFC4-208ENST00000447345 CDHR1Q96JP9 859 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 MTG1Q9BT17 334 aaPredicted RBP13.58□□□□□ -0.24
RFC4-208ENST00000447345 TELO2Q9Y4R8 837 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 TANC1Q9C0D5 1861 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 ELP1O95163 1332 aa13.58□□□□□ -0.24
RFC4-208ENST00000447345 FAM86B1E9PN63 330 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 DDX39AO00148 427 aaKnown RBP13.57□□□□□ -0.24
RFC4-208ENST00000447345 CABYRO75952 493 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 FAM86B2P0C5J1 330 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 ARP10275 920 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 ITGA7Q13683 1181 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 TRIM29Q14134 588 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 DGKDQ16760 1214 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 PRPF38BQ5VTL8 546 aaKnown RBP13.57□□□□□ -0.24
RFC4-208ENST00000447345 GALNT17Q6IS24 598 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 METTL7BQ6UX53 244 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 PLA2G4DQ86XP0 818 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 FAM184AQ8NB25 1140 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms