RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SLC1A4P43007 532 aa21.09■□□□□ 0.97
SDCBP-204ENST00000447182 SKOR1P84550 965 aa21.09■□□□□ 0.97
SDCBP-204ENST00000447182 SLC9C1Q4G0N8 1177 aa21.09■□□□□ 0.97
SDCBP-204ENST00000447182 KRT79Q5XKE5 535 aa21.09■□□□□ 0.97
SDCBP-204ENST00000447182 TSEN2Q8NCE0 465 aaKnown RBP21.09■□□□□ 0.97
SDCBP-204ENST00000447182 CEP95Q96GE4 821 aa21.09■□□□□ 0.97
SDCBP-204ENST00000447182 VAT1LQ9HCJ6 419 aa21.09■□□□□ 0.97
SDCBP-204ENST00000447182 COL4A3BPQ9Y5P4 624 aa21.09■□□□□ 0.97
SDCBP-204ENST00000447182 HSF2BPO75031 334 aa21.08■□□□□ 0.97
SDCBP-204ENST00000447182 FKBP3Q00688 224 aaKnown RBP21.08■□□□□ 0.97
SDCBP-204ENST00000447182 RC3H1Q5TC82 1133 aaKnown RBP21.08■□□□□ 0.97
SDCBP-204ENST00000447182 C15orf52Q6ZUT6 534 aaKnown RBP21.08■□□□□ 0.97
SDCBP-204ENST00000447182 ZNF804AQ7Z570 1209 aa21.08■□□□□ 0.97
SDCBP-204ENST00000447182 MYOCDQ8IZQ8 938 aa21.08■□□□□ 0.97
SDCBP-204ENST00000447182 SNX29Q8TEQ0 813 aa21.08■□□□□ 0.97
SDCBP-204ENST00000447182 PSMB7Q99436 277 aa21.08■□□□□ 0.97
SDCBP-204ENST00000447182 LUC7LQ9NQ29 371 aaKnown RBP21.08■□□□□ 0.97
SDCBP-204ENST00000447182 GDF3Q9NR23 364 aa21.08■□□□□ 0.97
SDCBP-204ENST00000447182 SMARCAL1Q9NZC9 954 aa21.08■□□□□ 0.97
SDCBP-204ENST00000447182 EHD2Q9NZN4 543 aa21.08■□□□□ 0.97
SDCBP-204ENST00000447182 ANKIB1Q9P2G1 1089 aa21.08■□□□□ 0.97
SDCBP-204ENST00000447182 SERPING1P05155 500 aa21.08■□□□□ 0.96
SDCBP-204ENST00000447182 TTC31Q49AM3 519 aaPredicted RBP21.08■□□□□ 0.96
SDCBP-204ENST00000447182 IFT20Q8IY31 132 aa21.08■□□□□ 0.96
SDCBP-204ENST00000447182 GPR75-ASB3A0A0A6YYF3 556 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 POTEMA6NI47 508 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 RPS6KA4O75676 772 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 NOL4O94818 638 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 TDP2O95551 362 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 BTDP43251 543 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 ADCY7P51828 1080 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 ANKRD13CQ8N6S4 541 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 DNAJC19Q96DA6 116 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 RUFY1Q96T51 708 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 SRP68Q9UHB9 627 aaKnown RBP21.07■□□□□ 0.96
SDCBP-204ENST00000447182 A0A087WUV0 522 aaPredicted RBP21.07■□□□□ 0.96
SDCBP-204ENST00000447182 GRID2IPA4D2P6 1211 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 USP17L5A8MUK1 530 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 MARSP56192 900 aaKnown RBP21.07■□□□□ 0.96
SDCBP-204ENST00000447182 ATP2B2Q01814 1243 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 NAB2Q15742 525 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 TDRD12Q587J7 1177 aaKnown RBP21.07■□□□□ 0.96
SDCBP-204ENST00000447182 SFMBT2Q5VUG0 894 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 PPP4R3AQ6IN85 833 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 KCNK18Q7Z418 384 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 CEP63Q96MT8 703 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 NUDT12Q9BQG2 462 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 TANGO6Q9C0B7 1094 aa21.07■□□□□ 0.96
SDCBP-204ENST00000447182 BUB1O43683 1085 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 TLR2O60603 784 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 PDHBP11177 359 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 PLCG2P16885 1265 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 APBA1Q02410 837 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 TTMPQ5BVD1 217 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 FAM83BQ5T0W9 1011 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 PACS2Q86VP3 889 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 GLIS3Q8NEA6 775 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 UBA5Q9GZZ9 404 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 ATAD5Q96QE3 1844 aa21.06■□□□□ 0.96
SDCBP-204ENST00000447182 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 TNRC6CQ9HCJ0 1690 aaKnown RBP21.05■□□□□ 0.96
SDCBP-204ENST00000447182 EBAG9O00559 213 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 GNA14O95837 355 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 MRPS25P82663 173 aaKnown RBP21.05■□□□□ 0.96
SDCBP-204ENST00000447182 COASYQ13057 564 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 LRRC41Q15345 812 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 TEX11Q8IYF3 940 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 CCDC24Q8N4L8 307 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 MREGQ8N565 214 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 ATP6V0A2Q9Y487 856 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 PCDHGC5Q9Y5F6 944 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 PLIN4Q96Q06 1357 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 ZPR1O75312 459 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 CCT5P48643 541 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 GNGT1P63211 74 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 GRAPQ13588 217 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 ASPRV1Q53RT3 343 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 PPP1R18Q6NYC8 613 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 TADA2BQ86TJ2 420 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 IQCKQ8N0W5 287 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 GRAPLQ8TC17 118 aaPredicted RBP21.05■□□□□ 0.96
SDCBP-204ENST00000447182 BCAS4Q8TDM0 211 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 ARL8AQ96BM9 186 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 MS4A14Q96JA4 679 aa21.05■□□□□ 0.96
SDCBP-204ENST00000447182 GLI1P08151 1106 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 KCNQ4P56696 695 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 PAK2Q13177 524 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 HYIQ5T013 277 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 ZIM3Q96PE6 472 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 NLRC4Q9NPP4 1024 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 SHTN1A0MZ66 631 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 ANKRD65E5RJM6 399 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 TRAF5O00463 557 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 NAP1L1P55209 391 aaKnown RBP21.04■□□□□ 0.96
SDCBP-204ENST00000447182 SLC18A3Q16572 532 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 CCDC40Q4G0X9 1142 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 FAM26FQ5R3K3 315 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 EMC10Q5UCC4 262 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 TRIM59Q8IWR1 403 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms