RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 PRR5LQ6MZQ0 368 aa19.45■□□□□ 0.7
ATG9A-215ENST00000446716 CCDC110Q8TBZ0 833 aa19.45■□□□□ 0.7
ATG9A-215ENST00000446716 NSUN6Q8TEA1 469 aaKnown RBP19.45■□□□□ 0.7
ATG9A-215ENST00000446716 VIMP08670 466 aaKnown RBP19.45■□□□□ 0.7
ATG9A-215ENST00000446716 CROCCP2Q86T23 111 aa19.45■□□□□ 0.7
ATG9A-215ENST00000446716 AFAP1L2Q8N4X5 818 aa19.45■□□□□ 0.7
ATG9A-215ENST00000446716 C7orf31Q8N865 590 aa19.45■□□□□ 0.7
ATG9A-215ENST00000446716 ZFP91Q96JP5 570 aaPredicted RBP19.45■□□□□ 0.7
ATG9A-215ENST00000446716 ZBED2Q9BTP6 218 aa19.45■□□□□ 0.7
ATG9A-215ENST00000446716 PCDHA6Q9UN73 950 aa19.45■□□□□ 0.7
ATG9A-215ENST00000446716 PCDHA8Q9Y5H6 950 aa19.45■□□□□ 0.7
ATG9A-215ENST00000446716 CTAGE3PQ8IX95 158 aa19.45■□□□□ 0.7
ATG9A-215ENST00000446716 A6NJR5 290 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 GRIN3BO60391 1043 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 MYL1P05976 194 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 GNAT1P11488 350 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 JAK3P52333 1124 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 TBC1D10CQ8IV04 446 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 LINC00301Q8NCQ3 95 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 RAB17Q9H0T7 212 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 COBLO75128 1261 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 TBC1D8O95759 1140 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 AFPP02771 609 aaKnown RBP19.44■□□□□ 0.7
ATG9A-215ENST00000446716 KRT15P19012 456 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 MAN1A1P33908 653 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 MYO1EQ12965 1108 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 PTPROQ16827 1216 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 MAP7D3Q8IWC1 876 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 BHMT2Q9H2M3 363 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 SETD1BQ9UPS6 1966 aaKnown RBP19.44■□□□□ 0.7
ATG9A-215ENST00000446716 THAP12O43422 761 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 MICALL2Q8IY33 904 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 SEPT10Q9P0V9 454 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 SAR1BQ9Y6B6 198 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 BUB1O43683 1085 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 PLCG1P19174 1290 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 TBC1D16Q8TBP0 767 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 CPVLQ9H3G5 476 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 SH3GLB2Q9NR46 395 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 EMILIN3Q9NT22 766 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 PCDHB6Q9Y5E3 794 aa19.44■□□□□ 0.7
ATG9A-215ENST00000446716 F5H6K3 240 aa19.43■□□□□ 0.7
ATG9A-215ENST00000446716 KLRC3Q07444 240 aa19.43■□□□□ 0.7
ATG9A-215ENST00000446716 NBPF11Q86T75 865 aa19.43■□□□□ 0.7
ATG9A-215ENST00000446716 GIMAP8Q8ND71 665 aaPredicted RBP19.43■□□□□ 0.7
ATG9A-215ENST00000446716 HERC5Q9UII4 1024 aaKnown RBP19.43■□□□□ 0.7
ATG9A-215ENST00000446716 MYO1FO00160 1098 aa19.43■□□□□ 0.7
ATG9A-215ENST00000446716 PRPF38AQ8NAV1 312 aaKnown RBP19.43■□□□□ 0.7
ATG9A-215ENST00000446716 FAM167AQ96KS9 214 aa19.43■□□□□ 0.7
ATG9A-215ENST00000446716 DESI2Q9BSY9 194 aa19.43■□□□□ 0.7
ATG9A-215ENST00000446716 SMYD4Q8IYR2 804 aaPredicted RBP19.43■□□□□ 0.7
ATG9A-215ENST00000446716 VPS52Q8N1B4 723 aa19.43■□□□□ 0.7
ATG9A-215ENST00000446716 TIGD1Q96MW7 591 aa19.43■□□□□ 0.7
ATG9A-215ENST00000446716 SUGT1Q9Y2Z0 365 aa19.43■□□□□ 0.7
ATG9A-215ENST00000446716 EEF1GP26641 437 aaKnown RBP19.42■□□□□ 0.7
ATG9A-215ENST00000446716 TCP11Q8WWU5 503 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 CNOT7Q9UIV1 285 aaKnown RBP19.42■□□□□ 0.7
ATG9A-215ENST00000446716 EBAG9O00559 213 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 DDIT3P35638 169 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 BARGINQ6ZT62 677 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 MICAL1Q8TDZ2 1067 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 FAM81BQ96LP2 452 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 RPF1Q9H9Y2 349 aaKnown RBP19.42■□□□□ 0.7
ATG9A-215ENST00000446716 BZW2Q9Y6E2 419 aaKnown RBP19.42■□□□□ 0.7
ATG9A-215ENST00000446716 ELF1P32519 619 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 VPS41P49754 854 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 FYB2Q5VWT5 728 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 FTOQ9C0B1 505 aaKnown RBP eCLIP19.42■□□□□ 0.76e-6■□□□□ 9
ATG9A-215ENST00000446716 NKX1-1Q15270 411 aaPredicted RBP19.42■□□□□ 0.7
ATG9A-215ENST00000446716 RUFY4Q6ZNE9 571 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 INTS8Q75QN2 995 aaKnown RBP19.42■□□□□ 0.7
ATG9A-215ENST00000446716 NEDD4P46934 1319 aa19.42■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L15C9J2P7 530 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L13C9JLJ4 530 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L11C9JVI0 530 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L18D6R9N7 530 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L22D6RA61 530 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L17D6RBQ6 530 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L19D6RCP7 530 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L20D6RJB6 530 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L24Q0WX57 530 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 SURF1Q15526 300 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 USP17L6PQ6QN14 398 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 GRAMD1CQ8IYS0 662 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 LRRC4Q9HBW1 653 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 SRPRBQ9Y5M8 271 aaKnown RBP19.41■□□□□ 0.7
ATG9A-215ENST00000446716 KRIT1O00522 736 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 MXI1P50539 228 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 ZNF658Q5TYW1 1059 aaPredicted RBP19.41■□□□□ 0.7
ATG9A-215ENST00000446716 HHATQ5VTY9 493 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 ARL6IP4Q66PJ3 421 aaKnown RBP19.41■□□□□ 0.7
ATG9A-215ENST00000446716 C4orf50Q6ZRC1 276 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 FASTKD5Q7L8L6 764 aaKnown RBP19.41■□□□□ 0.7
ATG9A-215ENST00000446716 GRK7Q8WTQ7 553 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 DDX23Q9BUQ8 820 aaKnown RBP19.41■□□□□ 0.7
ATG9A-215ENST00000446716 ABCB11O95342 1321 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 LMNB1P20700 586 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 PALM2Q8IXS6 379 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 BBS5Q8N3I7 341 aa19.41■□□□□ 0.7
ATG9A-215ENST00000446716 HYOU1Q9Y4L1 999 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms