RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 GJC2Q5T442 439 aaPredicted RBP16.04■□□□□ 0.16
SSBP3-208ENST00000444533 NIPA1Q7RTP0 329 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 DIS3L2Q8IYB7 885 aaKnown RBP16.04■□□□□ 0.16
SSBP3-208ENST00000444533 TBCKQ8TEA7 893 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 VTI1AQ96AJ9 217 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 LENG1Q96BZ8 264 aaPredicted RBP16.04■□□□□ 0.16
SSBP3-208ENST00000444533 MXRA8Q9BRK3 442 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 SDF4Q9BRK5 362 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 TSEN34Q9BSV6 310 aaKnown RBP16.04■□□□□ 0.16
SSBP3-208ENST00000444533 JADE2Q9NQC1 790 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 DDX41Q9UJV9 622 aaKnown RBP16.04■□□□□ 0.16
SSBP3-208ENST00000444533 GNEQ9Y223 722 aaKnown RBP16.04■□□□□ 0.16
SSBP3-208ENST00000444533 KIAA0100Q14667 2235 aaKnown RBP16.04■□□□□ 0.16
SSBP3-208ENST00000444533 SPATA31C2B4DYI2 1134 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 KPNA6O60684 536 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 GUCY1B3Q02153 619 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 LARP1BQ659C4 914 aaKnown RBP16.03■□□□□ 0.16
SSBP3-208ENST00000444533 CCDC62Q6P9F0 684 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 PIK3AP1Q6ZUJ8 805 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 PLA2G4DQ86XP0 818 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 FBXO18Q8NFZ0 1043 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 ZFP91Q96JP5 570 aaPredicted RBP16.03■□□□□ 0.16
SSBP3-208ENST00000444533 SENP7Q9BQF6 1050 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 HTATIP2Q9BUP3 242 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 UPF3AQ9H1J1 476 aaKnown RBP16.03■□□□□ 0.16
SSBP3-208ENST00000444533 C11orf49Q9H6J7 331 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 GJB4Q9NTQ9 266 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 UBIAD1Q9Y5Z9 338 aa16.03■□□□□ 0.16
SSBP3-208ENST00000444533 MARCH6O60337 910 aa16.02■□□□□ 0.16
SSBP3-208ENST00000444533 CABYRO75952 493 aa16.02■□□□□ 0.16
SSBP3-208ENST00000444533 GGPS1O95749 300 aa16.02■□□□□ 0.16
SSBP3-208ENST00000444533 GCFC2P16383 781 aaKnown RBP16.02■□□□□ 0.16
SSBP3-208ENST00000444533 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.16
SSBP3-208ENST00000444533 MCTP1Q6DN14 999 aa16.02■□□□□ 0.16
SSBP3-208ENST00000444533 NEK8Q86SG6 692 aa16.02■□□□□ 0.16
SSBP3-208ENST00000444533 SHISA4Q96DD7 197 aa16.02■□□□□ 0.16
SSBP3-208ENST00000444533 GLT1D1Q96MS3 346 aa16.02■□□□□ 0.16
SSBP3-208ENST00000444533 SPATA33Q96N06 139 aa16.02■□□□□ 0.16
SSBP3-208ENST00000444533 FOXP1Q9H334 677 aaPredicted RBP16.02■□□□□ 0.16
SSBP3-208ENST00000444533 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.15
SSBP3-208ENST00000444533 BTBD18B2RXH4 712 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 M0R2N6 131 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 ADAMTS4O75173 837 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 RGS20O76081 388 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 ARIH2O95376 493 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 ITGB5P18084 799 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 UBA1P22314 1058 aaKnown RBP16.01■□□□□ 0.15
SSBP3-208ENST00000444533 KCNA10Q16322 511 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 DGKDQ16760 1214 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 INF2Q27J81 1249 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 LETM2Q2VYF4 491 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 PRR16Q569H4 304 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 CELF3Q5SZQ8 465 aaKnown RBP16.01■□□□□ 0.15
SSBP3-208ENST00000444533 MOXD1Q6UVY6 613 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 EMID1Q96A84 441 aaPredicted RBP16.01■□□□□ 0.15
SSBP3-208ENST00000444533 PAWRQ96IZ0 340 aaKnown RBP16.01■□□□□ 0.15
SSBP3-208ENST00000444533 SENP6Q9GZR1 1112 aaPredicted RBP16.01■□□□□ 0.15
SSBP3-208ENST00000444533 KCNH7Q9NS40 1196 aa16.01■□□□□ 0.15
SSBP3-208ENST00000444533 NOL7Q9UMY1 257 aaKnown RBP16.01■□□□□ 0.15
SSBP3-208ENST00000444533 KIAA1217Q5T5P2 1943 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 MEIS1O00470 390 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 ADCY6O43306 1168 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 MYL3P08590 195 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 PDIA4P13667 645 aaKnown RBP16■□□□□ 0.15
SSBP3-208ENST00000444533 CIITAP33076 1130 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 ACLYP53396 1101 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 NR5A1Q13285 461 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 NPY5RQ15761 445 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 METTL7BQ6UX53 244 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 CYFIP1Q7L576 1253 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 KLHDC9Q8NEP7 349 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 PPTC7Q8NI37 304 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 OXER1Q8TDS5 423 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 COPS5Q92905 334 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 ZNF577Q9BSK1 485 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 PKD2L1Q9P0L9 805 aa16■□□□□ 0.15
SSBP3-208ENST00000444533 CCNT1O60563 726 aaKnown RBP15.99■□□□□ 0.15
SSBP3-208ENST00000444533 BAG4O95429 457 aaKnown RBP15.99■□□□□ 0.15
SSBP3-208ENST00000444533 ASGR1P07306 291 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 NKX3-2P78367 333 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 BEX3Q00994 111 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 ARHGAP1Q07960 439 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 MYSM1Q5VVJ2 828 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 AFG1LQ8WV93 481 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 KATNAL1Q9BW62 490 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 JPH1Q9HDC5 661 aaPredicted RBP15.99■□□□□ 0.15
SSBP3-208ENST00000444533 STARD7Q9NQZ5 370 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 TBC1D22BQ9NU19 505 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 DAXXQ9UER7 740 aaPredicted RBP15.99■□□□□ 0.15
SSBP3-208ENST00000444533 DDX25Q9UHL0 483 aaKnown RBP15.99■□□□□ 0.15
SSBP3-208ENST00000444533 PHF24Q9UPV7 400 aa15.99■□□□□ 0.15
SSBP3-208ENST00000444533 A6NJR5 290 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 FAM86B1E9PN63 330 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 IPO5O00410 1097 aaKnown RBP15.98■□□□□ 0.15
SSBP3-208ENST00000444533 SORBS3O60504 671 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 PPFIA4O75335 1185 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 FAM86B2P0C5J1 330 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 SP4Q02446 784 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms