RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 VSIG10LQ86VR7 867 aa23.04■■□□□ 1.28
EDEM1-203ENST00000443790 CERS4Q9HA82 394 aa23.04■■□□□ 1.28
EDEM1-203ENST00000443790 SENP2Q9HC62 589 aa23.04■■□□□ 1.28
EDEM1-203ENST00000443790 TAF6LQ9Y6J9 622 aa23.04■■□□□ 1.28
EDEM1-203ENST00000443790 XIRP2A4UGR9 3374 aa23.03■■□□□ 1.28
EDEM1-203ENST00000443790 EPOPA6NHQ4 379 aa23.03■■□□□ 1.28
EDEM1-203ENST00000443790 RFXAPO00287 272 aa23.03■■□□□ 1.28
EDEM1-203ENST00000443790 CYTH3O43739 400 aa23.03■■□□□ 1.28
EDEM1-203ENST00000443790 CXCL10P02778 98 aa23.03■■□□□ 1.28
EDEM1-203ENST00000443790 CKBP12277 381 aa23.03■■□□□ 1.28
EDEM1-203ENST00000443790 POU3F3P20264 500 aaPredicted RBP23.03■■□□□ 1.28
EDEM1-203ENST00000443790 WDR5P61964 334 aaKnown RBP23.03■■□□□ 1.28
EDEM1-203ENST00000443790 TROAPQ12815 778 aa23.03■■□□□ 1.28
EDEM1-203ENST00000443790 HSDL1Q3SXM5 330 aa23.03■■□□□ 1.28
EDEM1-203ENST00000443790 CELF3Q5SZQ8 465 aaKnown RBP23.03■■□□□ 1.28
EDEM1-203ENST00000443790 CNKSR3Q6P9H4 555 aa23.03■■□□□ 1.28
EDEM1-203ENST00000443790 TSPYL2Q9H2G4 693 aaPredicted RBP23.03■■□□□ 1.28
EDEM1-203ENST00000443790 MYH7BA7E2Y1 1941 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 E7EWF7 191 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 GCOM1H8Y6P7 765 aaPredicted RBP23.02■■□□□ 1.28
EDEM1-203ENST00000443790 NBNO60934 754 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 PPFIA4O75335 1185 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 GGPS1O95749 300 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 POLR2MP0CAP2 368 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 UBA1P22314 1058 aaKnown RBP23.02■■□□□ 1.28
EDEM1-203ENST00000443790 CCND2P30279 289 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 PTK7Q13308 1070 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 WTAPQ15007 396 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 SART3Q15020 963 aaKnown RBP23.02■■□□□ 1.28
EDEM1-203ENST00000443790 CENPQQ7L2Z9 268 aaPredicted RBP23.02■■□□□ 1.28
EDEM1-203ENST00000443790 NCOA7Q8NI08 942 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 ADAMTS19Q8TE59 1207 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 CCDC136Q96JN2 1154 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 SPATA33Q96N06 139 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 MTCH2Q9Y6C9 303 aa23.02■■□□□ 1.28
EDEM1-203ENST00000443790 PNMA6FA0A0J9YX94 578 aa23.01■■□□□ 1.27
EDEM1-203ENST00000443790 GTPBP6O43824 516 aaPredicted RBP23.01■■□□□ 1.27
EDEM1-203ENST00000443790 TLL1O43897 1013 aa23.01■■□□□ 1.27
EDEM1-203ENST00000443790 SORBS3O60504 671 aa23.01■■□□□ 1.27
EDEM1-203ENST00000443790 TGFB3P10600 412 aa23.01■■□□□ 1.27
EDEM1-203ENST00000443790 TRIM71Q2Q1W2 868 aaKnown RBP23.01■■□□□ 1.27
EDEM1-203ENST00000443790 FCHSD1Q86WN1 690 aa23.01■■□□□ 1.27
EDEM1-203ENST00000443790 ARNTL2Q8WYA1 636 aa23.01■■□□□ 1.27
EDEM1-203ENST00000443790 SGSM2O43147 1006 aa23■■□□□ 1.27
EDEM1-203ENST00000443790 DEFB103AP81534 67 aa23■■□□□ 1.27
EDEM1-203ENST00000443790 SP2Q02086 613 aa23■■□□□ 1.27
EDEM1-203ENST00000443790 TRAF7Q6Q0C0 670 aa23■■□□□ 1.27
EDEM1-203ENST00000443790 SKAP1Q86WV1 359 aa23■■□□□ 1.27
EDEM1-203ENST00000443790 IL27Q8NEV9 243 aa23■■□□□ 1.27
EDEM1-203ENST00000443790 GPKOWQ92917 476 aaPredicted RBP eCLIP23■■□□□ 1.27
EDEM1-203ENST00000443790 WNT8BQ93098 351 aa23■■□□□ 1.27
EDEM1-203ENST00000443790 ZFP91Q96JP5 570 aaPredicted RBP23■■□□□ 1.27
EDEM1-203ENST00000443790 ZNF200P98182 395 aaPredicted RBP22.99■■□□□ 1.27
EDEM1-203ENST00000443790 HIC1Q14526 733 aa22.99■■□□□ 1.27
EDEM1-203ENST00000443790 TCTN1Q2MV58 587 aa22.99■■□□□ 1.27
EDEM1-203ENST00000443790 TMCO2Q7Z6W1 182 aaPredicted RBP22.99■■□□□ 1.27
EDEM1-203ENST00000443790 C16orf70Q9BSU1 422 aa22.99■■□□□ 1.27
EDEM1-203ENST00000443790 FRMPD4Q14CM0 1322 aa22.99■■□□□ 1.27
EDEM1-203ENST00000443790 BAZ2BQ9UIF8 2168 aaKnown RBP22.99■■□□□ 1.27
EDEM1-203ENST00000443790 COL4A4P53420 1690 aaPredicted RBP22.98■■□□□ 1.27
EDEM1-203ENST00000443790 ABHD14A-ACY1A0A1B0GW23 586 aa22.98■■□□□ 1.27
EDEM1-203ENST00000443790 ANTXR2P58335 489 aa22.98■■□□□ 1.27
EDEM1-203ENST00000443790 SKIV2LQ15477 1246 aaKnown RBP22.98■■□□□ 1.27
EDEM1-203ENST00000443790 ZNF618Q5T7W0 954 aa22.98■■□□□ 1.27
EDEM1-203ENST00000443790 SPRED2Q7Z698 418 aa22.98■■□□□ 1.27
EDEM1-203ENST00000443790 CATIPQ7Z7H3 387 aa22.98■■□□□ 1.27
EDEM1-203ENST00000443790 MB21D2Q8IYB1 491 aaPredicted RBP22.98■■□□□ 1.27
EDEM1-203ENST00000443790 UHRF1Q96T88 793 aaPredicted RBP22.98■■□□□ 1.27
EDEM1-203ENST00000443790 MLXIPQ9HAP2 919 aa22.98■■□□□ 1.27
EDEM1-203ENST00000443790 PRRC2BQ5JSZ5 2229 aaKnown RBP22.98■■□□□ 1.27
EDEM1-203ENST00000443790 LCHNA4D1U4 455 aa22.97■■□□□ 1.27
EDEM1-203ENST00000443790 MBTPS1Q14703 1052 aa22.97■■□□□ 1.27
EDEM1-203ENST00000443790 GNPTABQ3T906 1256 aa22.97■■□□□ 1.27
EDEM1-203ENST00000443790 KRT40Q6A162 431 aa22.97■■□□□ 1.27
EDEM1-203ENST00000443790 ZBED2Q9BTP6 218 aa22.97■■□□□ 1.27
EDEM1-203ENST00000443790 EFCAB14O75071 495 aa22.96■■□□□ 1.27
EDEM1-203ENST00000443790 GJB5O95377 273 aa22.96■■□□□ 1.27
EDEM1-203ENST00000443790 MRPS9P82933 396 aaKnown RBP22.96■■□□□ 1.27
EDEM1-203ENST00000443790 TFF2Q03403 129 aa22.96■■□□□ 1.27
EDEM1-203ENST00000443790 SERINC5Q86VE9 423 aa22.96■■□□□ 1.27
EDEM1-203ENST00000443790 IGDCC4Q8TDY8 1250 aa22.96■■□□□ 1.27
EDEM1-203ENST00000443790 MAP4K1Q92918 833 aa22.96■■□□□ 1.27
EDEM1-203ENST00000443790 INPP4AQ96PE3 977 aaPredicted RBP22.96■■□□□ 1.27
EDEM1-203ENST00000443790 STAM2O75886 525 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 LGALS2P05162 132 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 HOXC8P31273 242 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 ICAM3P32942 547 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 GRB10Q13322 594 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 IKBKEQ14164 716 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 AAK1Q2M2I8 961 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 PIBF1Q8WXW3 757 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 SPZ1Q9BXG8 430 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 BCAS3Q9H6U6 928 aa22.95■■□□□ 1.26
EDEM1-203ENST00000443790 RBM8AQ9Y5S9 174 aaKnown RBP22.95■■□□□ 1.26
EDEM1-203ENST00000443790 EMSYQ7Z589 1322 aa22.94■■□□□ 1.26
EDEM1-203ENST00000443790 H3BRB1 525 aa22.94■■□□□ 1.26
EDEM1-203ENST00000443790 LPXNO60711 386 aa22.94■■□□□ 1.26
EDEM1-203ENST00000443790 LGR5O75473 907 aa22.94■■□□□ 1.26
EDEM1-203ENST00000443790 ZNF654Q8IZM8 581 aa22.94■■□□□ 1.26
EDEM1-203ENST00000443790 MAP3K14Q99558 947 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms